RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 FLYWCH2Q96CP2 140 aaKnown RBP1.36□□□□□ -2.19
SCAF11-207ENST00000484275 TCHPQ9BT92 498 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 RSPH9Q9H1X1 276 aaPredicted RBP1.36□□□□□ -2.19
SCAF11-207ENST00000484275 POLE4Q9NR33 117 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 TAS2R3Q9NYW6 316 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 TMOD2Q9NZR1 351 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 TSSC4Q9Y5U2 329 aaPredicted RBP1.36□□□□□ -2.19
SCAF11-207ENST00000484275 ATP10AO60312 1499 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 CDHR2Q9BYE9 1310 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 ZSWIM8A7E2V4 1837 aa1.36□□□□□ -2.19
SCAF11-207ENST00000484275 ZNF716A6NP11 495 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 FCMRO60667 390 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 YIF1AO95070 293 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 HLA-DQA1P01909 254 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 UGT2B4P06133 528 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 IQCF3P0C7M6 154 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 ATP5C1P36542 298 aaKnown RBP1.35□□□□□ -2.19
SCAF11-207ENST00000484275 SERPINB5P36952 375 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 AQP2P41181 271 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 HTD2P86397 168 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 PDK4Q16654 411 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 ARL9Q6T311 187 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 HDDC2Q7Z4H3 204 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 DHDDSQ86SQ9 333 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 VSTM4Q8IW00 320 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 OR2T34Q8NGX1 318 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 OR2G2Q8NGZ5 317 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 C17orf50Q8WW18 174 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 ANGPTL4Q9BY76 406 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 FARSBQ9NSD9 589 aaKnown RBP1.35□□□□□ -2.19
SCAF11-207ENST00000484275 SAMHD1Q9Y3Z3 626 aaKnown RBP1.35□□□□□ -2.19
SCAF11-207ENST00000484275 TSPOAP1O95153 1857 aa1.35□□□□□ -2.19
SCAF11-207ENST00000484275 PLXNB1O43157 2135 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 MBLAC1A4D2B0 266 aaPredicted RBP1.34□□□□□ -2.19
SCAF11-207ENST00000484275 DNASE2O00115 360 aaPredicted RBP1.34□□□□□ -2.19
SCAF11-207ENST00000484275 UBXN8O00124 270 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 BPY2O14599 106 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 RPA2P15927 270 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 GDI2P50395 445 aaKnown RBP1.34□□□□□ -2.19
SCAF11-207ENST00000484275 ATP1B3P54709 279 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 NUTF2P61970 127 aaKnown RBP1.34□□□□□ -2.19
SCAF11-207ENST00000484275 MEF2CQ06413 473 aaPredicted RBP1.34□□□□□ -2.19
SCAF11-207ENST00000484275 FBXW12Q6X9E4 464 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 TEX43Q6ZNM6 134 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 ST20-AS1Q8NBB2 130 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 LKAAEAR1Q8TD35 194 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 HSFY1Q96LI6 401 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 PANX2Q96RD6 677 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 P2RX4Q99571 388 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 KLF6Q99612 283 aaPredicted RBP1.34□□□□□ -2.19
SCAF11-207ENST00000484275 SH3GL3Q99963 347 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 PPA2Q9H2U2 334 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 KLHL28Q9NXS3 571 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 UVRAGQ9P2Y5 699 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 CDH9Q9ULB4 789 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 IKBKGQ9Y6K9 419 aa1.34□□□□□ -2.19
SCAF11-207ENST00000484275 CAMTA1Q9Y6Y1 1673 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 TRAV39A0A0B4J263 110 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 A0A0B4J2A0 478 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 A0A1B0GWJ7 208 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 C5orf63A6NC05 138 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 CCL21O00585 134 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 C1orf105O95561 183 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 CD74P04233 296 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 ZNF735P0CB33 412 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 IFT88Q13099 833 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 NADK2Q4G0N4 442 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 RIPPLY2Q5TAB7 128 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 SASS6Q6UVJ0 657 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 ASCL5Q7RTU5 278 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 OAFQ86UD1 273 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 TMEM105Q8N8V8 129 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 SENP8Q96LD8 212 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 ZNF488Q96MN9 340 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 LZTS2Q9BRK4 669 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 TPPP3Q9BW30 176 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 TMEM59Q9BXS4 323 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 OR52D1Q9H346 318 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 DDX19AQ9NUU7 478 aaKnown RBP1.33□□□□□ -2.2
SCAF11-207ENST00000484275 CGNQ9P2M7 1197 aaKnown RBP1.33□□□□□ -2.2
SCAF11-207ENST00000484275 CTSFQ9UBX1 484 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 SHPKQ9UHJ6 478 aa1.33□□□□□ -2.2
SCAF11-207ENST00000484275 AHDC1Q5TGY3 1603 aaPredicted RBP1.33□□□□□ -2.2
SCAF11-207ENST00000484275 TRIP11Q15643 1979 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 IGHV3OR16-8A0A075B7F1 116 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 F6UB75 175 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 H0YJW9 148 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 J3QKU1 62 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 SOCS1O15524 211 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 EIF3GO75821 320 aaKnown RBP eCLIP1.32□□□□□ -2.2
SCAF11-207ENST00000484275 RAB3DO95716 219 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 HLA-DQB1P01920 261 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 GLAP06280 429 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 RBX1P62877 108 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 TPD52L1Q16890 204 aaPredicted RBP1.32□□□□□ -2.2
SCAF11-207ENST00000484275 PTPN20Q4JDL3 420 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 WDFY1Q8IWB7 410 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 TMEM104Q8NE00 496 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 C1orf64Q8NEQ6 169 aa1.32□□□□□ -2.2
SCAF11-207ENST00000484275 OR6N1Q8NGY5 312 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms