RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TRAPPC6AO75865 159 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 HLA-DQA2P01906 255 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 CD46P15529 392 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 GFRA1P56159 465 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 TEX30Q5JUR7 227 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 ARL9Q6T311 187 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 DPY19L4Q7Z388 723 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 GPAT4Q86UL3 456 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 RPS4Y2Q8TD47 263 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 SF3B5Q9BWJ5 86 aaKnown RBP23.41■■□□□ 1.34
SHOX2-204ENST00000483851 PLA2G3Q9NZ20 509 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 GVINP1Q7Z2Y8 2422 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 TLX3O43711 291 aaPredicted RBP23.41■■□□□ 1.34
SHOX2-204ENST00000483851 KRT8P05787 483 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 SPNP16150 400 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF79Q15937 498 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 NOXO1Q8NFA2 376 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 PGLYRP3Q96LB9 341 aa23.41■■□□□ 1.34
SHOX2-204ENST00000483851 MRPL22Q9NWU5 206 aaKnown RBP23.41■■□□□ 1.34
SHOX2-204ENST00000483851 ALPK2Q86TB3 2170 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 FAM186AA6NE01 2351 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF593O00488 134 aaPredicted RBP23.4■■□□□ 1.34
SHOX2-204ENST00000483851 RGS5O15539 181 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 GPRIN2O60269 458 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 SERPINA3P01011 423 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 PGA4P0DJD7 388 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 PGA3P0DJD8 388 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 WIPI1Q5MNZ9 446 aaPredicted RBP23.4■■□□□ 1.34
SHOX2-204ENST00000483851 GDPD3Q7L5L3 318 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 GGNQ86UU5 652 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 HDHD5Q9BXW7 423 aa23.4■■□□□ 1.34
SHOX2-204ENST00000483851 COA3Q9Y2R0 106 aaPredicted RBP23.4■■□□□ 1.34
SHOX2-204ENST00000483851 NCKAP5O14513 1909 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF891A8MT65 544 aaPredicted RBP23.39■■□□□ 1.34
SHOX2-204ENST00000483851 CLN3Q13286 438 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 PCK2Q16822 640 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 SLC18B1Q6NT16 456 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 SLC26A10Q8NG04 563 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 TTYH2Q9BSA4 534 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 SRRQ9GZT4 340 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 ZNF552Q9H707 407 aaPredicted RBP23.39■■□□□ 1.34
SHOX2-204ENST00000483851 ABCB9Q9NP78 766 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 ACOXLQ9NUZ1 547 aa23.39■■□□□ 1.34
SHOX2-204ENST00000483851 FREM3P0C091 2139 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 ZNF726A6NNF4 738 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 TNFSF11O14788 317 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 CLRN1P58418 232 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 ETFDHQ16134 617 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 HIST3H3Q16695 136 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 PDSS1Q5T2R2 415 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 PAMR1Q6UXH9 720 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 TMEM91Q6ZNR0 172 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 HTRA1Q92743 480 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 ADGRG7Q96K78 797 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 EMC6Q9BV81 110 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 TTTY12Q9BZ98 90 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 KLHDC2Q9Y2U9 406 aa23.39■■□□□ 1.33
SHOX2-204ENST00000483851 SC5DO75845 299 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 GLSO94925 669 aaPredicted RBP23.38■■□□□ 1.33
SHOX2-204ENST00000483851 ABHD16AO95870 558 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 CARD18P57730 90 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 ADAM8P78325 824 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 GLB1L2Q8IW92 636 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 OR2V1Q8NHB1 315 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 GHSRQ92847 366 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 SCMH1Q96GD3 660 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 TTTY10Q9BZA0 68 aa23.38■■□□□ 1.33
SHOX2-204ENST00000483851 MRM2Q9UI43 246 aaKnown RBP23.38■■□□□ 1.33
SHOX2-204ENST00000483851 KIAA1549Q9HCM3 1950 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 RAMP1O60894 148 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 AQP8O94778 261 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 PRKAR1AP10644 381 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 ZNF823P16415 610 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 POU3F2P20265 443 aaPredicted RBP23.37■■□□□ 1.33
SHOX2-204ENST00000483851 GDI2P50395 445 aaKnown RBP23.37■■□□□ 1.33
SHOX2-204ENST00000483851 DEFA1P59665 94 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 DEFA3P59666 94 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 ROM1Q03395 351 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 SLC3A1Q07837 685 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 HBMQ6B0K9 141 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 KCTD18Q6PI47 426 aaPredicted RBP23.37■■□□□ 1.33
SHOX2-204ENST00000483851 RPTNQ6XPR3 784 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 CREB3L2Q70SY1 520 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 ABHD4Q8TB40 342 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 TIGARQ9NQ88 270 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 C14orf119Q9NWQ9 140 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 TBC1D24Q9ULP9 559 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 CNTRLQ7Z7A1 2325 aa23.37■■□□□ 1.33
SHOX2-204ENST00000483851 TRBV2A0A0J9YWF9 115 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 SHISA3A0PJX4 238 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 A6NL46 340 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 ENPP1P22413 925 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 CLDN20P56880 219 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 FMODQ06828 376 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 CD300CQ08708 224 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 SLC17A1Q14916 467 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 TRILQ7L0X0 811 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 WDFY1Q8IWB7 410 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 TEX19Q8NA77 164 aa23.36■■□□□ 1.33
SHOX2-204ENST00000483851 TMEM178AQ8NBL3 297 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms