RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MAP6Q96JE9 813 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 AMELYQ99218 206 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 TTTY12Q9BZ98 90 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 B4GALT7Q9UBV7 327 aa12.51□□□□□ -0.41
CLK3-204ENST00000483723 PLEKHB1Q9UF11 243 aaPredicted RBP12.51□□□□□ -0.41
CLK3-204ENST00000483723 PTPRZ1P23471 2315 aaPredicted RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 ZNF726A6NNF4 738 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 KLRC4-KLRK1H3BQV0 150 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 DVL2O14641 736 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 AQP8O94778 261 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 MPZL1O95297 269 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 SERPINA3P01011 423 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 ETV6P41212 452 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 RPS27P42677 84 aaKnown RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 MTNR1BP49286 362 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 SUCLG1P53597 346 aaKnown RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 CARD18P57730 90 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 NANOS3P60323 173 aaKnown RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 CAMK2DQ13557 499 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 ACSM3Q53FZ2 586 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 IGFL2Q6UWQ7 119 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 GLB1L2Q8IW92 636 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 ZFP62Q8NB50 900 aaPredicted RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 OR2V1Q8NHB1 315 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 PHYHIPQ92561 330 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 FOXN4Q96NZ1 517 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 UCN2Q96RP3 112 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 PPIL3Q9H2H8 161 aaKnown RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 QPCTLQ9NXS2 382 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 SLCO1C1Q9NYB5 712 aa12.5□□□□□ -0.41
CLK3-204ENST00000483723 CRNNQ9UBG3 495 aaPredicted RBP12.5□□□□□ -0.41
CLK3-204ENST00000483723 TRABD2BA6NFA1 517 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 A6NL46 340 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 H0YC42 278 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 PSMD9O00233 223 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 SMAD9O15198 467 aaKnown RBP12.49□□□□□ -0.41
CLK3-204ENST00000483723 TLX3O43711 291 aaPredicted RBP12.49□□□□□ -0.41
CLK3-204ENST00000483723 GATBO75879 557 aaKnown RBP12.49□□□□□ -0.41
CLK3-204ENST00000483723 ZNF432O94892 652 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 CD46P15529 392 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 ENPP1P22413 925 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 LAP3P28838 519 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 STARP49675 285 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 CLDN17P56750 224 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 CLRN1P58418 232 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 ADAM8P78325 824 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 MXD1Q05195 221 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 ALKBH1Q13686 389 aaKnown RBP12.49□□□□□ -0.41
CLK3-204ENST00000483723 KCNMB1Q16558 191 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 MEP1BQ16820 701 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 HBMQ6B0K9 141 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 LRFN4Q6PJG9 635 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 PAMR1Q6UXH9 720 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 CEACAM19Q7Z692 300 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 ZNF679Q8IYX0 411 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 TMEM251Q8N6I4 163 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 YIPF7Q8N8F6 280 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 OR9K2Q8NGE7 335 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 TMEM54Q969K7 222 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 MCHR2Q969V1 340 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 TTYH2Q9BSA4 534 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 ABHD6Q9BV23 337 aa12.49□□□□□ -0.41
CLK3-204ENST00000483723 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
CLK3-204ENST00000483723 ZNF891A8MT65 544 aaPredicted RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 TAF4O00268 1085 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 CTDSP2O14595 271 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 EIF1AYO14602 144 aaKnown RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 SPARCP09486 303 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 PRKAR1AP10644 381 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ZNF823P16415 610 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 MEOX1P50221 254 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 INAQ16352 499 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 KCTD18Q6PI47 426 aaPredicted RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 C11orf40Q8WZ69 217 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 C6orf62Q9GZU0 229 aaPredicted RBP12.48□□□□□ -0.41
CLK3-204ENST00000483723 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ELOVL3Q9HB03 270 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 FRRS1LQ9P0K9 344 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 B3GNT3Q9Y2A9 372 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ZNF281Q9Y2X9 895 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 IGHV3-15A0A0B4J1V0 119 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 TRAV1-2A0A0B4J238 106 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 OR4C45A6NMZ5 311 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ZNF716A6NP11 495 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 J3QRK9 145 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 CASKO14936 926 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 ZFPL1O95159 310 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 UCHL1P09936 223 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 NR2C1P13056 603 aa12.48□□□□□ -0.41
CLK3-204ENST00000483723 POU3F2P20265 443 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms