RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 DAOP14920 347 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 NME2P22392 152 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 CD80P33681 288 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 RBM34P42696 430 aaKnown RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 DEFA6Q01524 100 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZIC1Q15915 447 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 TMEM244Q5VVB8 128 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZNF425Q6IV72 752 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 DHRS11Q6UWP2 260 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 PARS2Q7L3T8 475 aaKnown RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 DEFB128Q7Z7B8 93 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZNF619Q8N2I2 560 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 CASTOR1Q8WTX7 329 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 GTF3AQ92664 365 aaKnown RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 TMEM106AQ96A25 262 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 RASD2Q96D21 266 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 AKR1E2Q96JD6 320 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 RHOVQ96L33 236 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 LINC00615Q96LM1 132 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 LMF1Q96S06 567 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 GAS2L1Q99501 681 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 TMPRSS5Q9H3S3 457 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 XKR8Q9H6D3 395 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZMAT3Q9HA38 289 aaKnown RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 IL23AQ9NPF7 189 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 CACFD1Q9UGQ2 172 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 MSRAQ9UJ68 235 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 TRBV5-7A0A0A0MS05 114 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 AP4M1O00189 453 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 NID1P14543 1247 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 CSF2RAP15509 400 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 HLA-GP17693 338 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZNF627Q7L945 461 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 CD163Q86VB7 1156 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 OR4N5Q8IXE1 308 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZSCAN4Q8NAM6 433 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 OR5K2Q8NHB8 316 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 PHOSPHO2Q8TCD6 241 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 BADQ92934 168 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 FAM3DQ96BQ1 224 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 RNF126Q9BV68 326 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 CHMP1AQ9HD42 196 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 TREM2Q9NZC2 230 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 SLC27A6Q9Y2P4 619 aa10.7□□□□□ -0.7
VTI1A-205ENST00000483122 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.7□□□□□ -0.7
VTI1A-205ENST00000483122 C13orf42A0A1B0GVH6 325 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 A0A1B0GWA3 101 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 C9orf170A2RU37 121 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TBC1D3BA6NDS4 549 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TBC1D3FA6NER0 549 aaPredicted RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 MSGN1A6NI15 193 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 NPIPB9F8W1W9 429 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 CRHP06850 196 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SNRNP70P08621 437 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 RPS4Y1P22090 263 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 PSMB6P28072 239 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 LPAR6P43657 344 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 PPICP45877 212 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 ID4P47928 161 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 CSNK1EP49674 416 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 RGS19P49795 217 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 OR2B8PP59922 312 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SKP1P63208 163 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 NAAAQ02083 359 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SSBP1Q04837 148 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SKP2Q13309 424 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 CEBPEQ15744 281 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TMEM35AQ53FP2 167 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 KLHL26Q53HC5 615 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TBC1D3GQ6DHY5 549 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 DRAM2Q6UX65 266 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 ADIPOR2Q86V24 386 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 NRSN1Q8IZ57 195 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 OR4S1Q8NGB4 309 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TSSK2Q96PF2 358 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TEX101Q9BY14 249 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 ZNF350Q9GZX5 532 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 OR2S2Q9NQN1 319 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 IL36AQ9UHA7 158 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 TMED7Q9Y3B3 224 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SNRNP200O75643 2136 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 A0A0B4J2E0 115 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 A0A1B0GX12 115 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 C5orf51A6NDU8 294 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 FAM157AC9JC47 383 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 H0YIZ8 118 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SPINT1O43278 529 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 VEGFDO43915 354 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 CDC40O60508 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 NDUFB2O95178 105 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 CD5P06127 495 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 CD2P06729 351 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 DBIP07108 87 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 RHOP08100 348 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 LAP3P28838 519 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 RPL4P36578 427 aaKnown RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
VTI1A-205ENST00000483122 SCAND1P57086 179 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 RAB2AP61019 212 aa10.69□□□□□ -0.7
VTI1A-205ENST00000483122 ARHGAP19Q14CB8 494 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms