RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 HDDC2Q7Z4H3 204 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 CALHM3Q86XJ0 350 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 OR1J1Q8NGS3 322 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 OR51F2Q8NH61 342 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 NSMAFQ92636 917 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 FAHD2AQ96GK7 314 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 SEPHS2Q99611 448 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 TMEM120AQ9BXJ8 343 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 SIAEQ9HAT2 523 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 CCNB1IP1Q9NPC3 277 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 MED31Q9Y3C7 131 aa14.15□□□□□ -0.14
RAB11FIP3-209ENST00000483002 IFNA14P01570 189 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 STOMP27105 288 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 MRPS34P82930 218 aaKnown RBP14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 FMODQ06828 376 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 SF3A3Q12874 501 aaKnown RBP eCLIP14.14□□□□□ -0.159e-8■■■□□ 19.2
RAB11FIP3-209ENST00000483002 MOGQ16653 247 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TSTQ16762 297 aaKnown RBP14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 C10orf128Q5T292 105 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ARMC4Q5T2S8 1044 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 SHQ1Q6PI26 577 aaKnown RBP14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 THSD4Q6ZMP0 1018 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 OR8J3Q8NGG0 315 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 C10orf82Q8WW14 230 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 GTF3AQ92664 365 aaKnown RBP14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 HDAC2Q92769 488 aaKnown RBP14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF583Q96ND8 569 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 DECR2Q9NUI1 292 aa14.14□□□□□ -0.15
RAB11FIP3-209ENST00000483002 IGKV1D-43A0A0B4J1Z2 117 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 IGHV1-69-2A0A0G2JMI3 117 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 FXYD1O00168 92 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 MGRN1O60291 552 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 VENTXO95231 258 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 MT-ND5P03915 603 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ANPEPP15144 967 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF32P17041 273 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 CRYBB2P43320 205 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF133P52736 654 aaPredicted RBP14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 CD47Q08722 323 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ERICH5Q6P6B1 374 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 USP51Q70EK9 711 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 AKR7LQ8NHP1 331 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 LIPHQ8WWY8 451 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TPD52L3Q96J77 140 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 POLR2J2Q9GZM3 115 aaKnown RBP14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 POLR2J3Q9H1A7 115 aaKnown RBP14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TXNIPQ9H3M7 391 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 NKIRAS2Q9NYR9 191 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 STX18Q9P2W9 335 aaKnown RBP14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 EIF3KQ9UBQ5 218 aaKnown RBP14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 UGT2A1Q9Y4X1 527 aa14.13□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TRAV20A0A0B4J274 112 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 LOC100653049A0A140TA62 436 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 C5orf49A4QMS7 147 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 MRASO14807 208 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 PIP5K1CO60331 668 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 RGS9O75916 674 aaPredicted RBP14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 KRT34O76011 436 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 NPPAP01160 153 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 IGF2P01344 180 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 IGHV3-13P01766 116 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TSPAN19P0C672 248 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 THRBP10828 461 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ERVK-25P63136 954 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TEKQ02763 1124 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 TOP3AQ13472 1001 aaPredicted RBP14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF718Q3SXZ3 478 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 LRRC23Q53EV4 343 aaPredicted RBP14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 CYBRD1Q53TN4 286 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ALG10Q5BKT4 473 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 SPATA46Q5T0L3 261 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 THEM4Q5T1C6 240 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ACSM5Q6NUN0 579 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF101Q8IZC7 436 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 NABP1Q96AH0 204 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 NMD3Q96D46 503 aaKnown RBP14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 POM121L2Q96KW2 1035 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 SMURF2Q9HAU4 748 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 CACNG2Q9Y698 323 aa14.12□□□□□ -0.15
RAB11FIP3-209ENST00000483002 LOC100509620A0A075B734 347 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 SPRY3O43610 288 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 MPZL1O95297 269 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 IFI30P13284 250 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 GCH1P30793 250 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 KDELR2P33947 212 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 MPV17P39210 176 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 WNT5AP41221 380 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 GDI2P50395 445 aaKnown RBP14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 ZNF81P51508 661 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 PSG4Q00888 419 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 KLF10Q13118 480 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 HFEQ30201 348 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 COQ5Q5HYK3 327 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 FAM27BQ5VT28 67 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 SLC25A47Q6Q0C1 308 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 CLDN22Q8N7P3 220 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 RBP7Q96R05 134 aa14.11□□□□□ -0.15
RAB11FIP3-209ENST00000483002 VIPAS39Q9H9C1 493 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms