RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GPBAR1Q8TDU6 330 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 GLYATL2Q8WU03 294 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 ST8SIA4Q92187 359 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 BORCS8Q96FH0 119 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 SORCS2Q96PQ0 1159 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 ST6GALNAC5Q9BVH7 336 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 LAT2Q9GZY6 243 aa13.09□□□□□ -0.31
COL20A1-206ENST00000479501 ISG20L2Q9H9L3 353 aaKnown RBP13.09□□□□□ -0.31
COL20A1-206ENST00000479501 HTR2CP28335 458 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 EVX1P49640 407 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 FZD2Q14332 565 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 H1FNTQ75WM6 255 aaPredicted RBP13.08□□□□□ -0.32
COL20A1-206ENST00000479501 SSX3Q99909 188 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 SEC22CQ9BRL7 303 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 PISDQ9UG56 409 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 B3GALT1Q9Y5Z6 326 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 DVL2O14641 736 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 AKR7A2O43488 359 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 MED6O75586 246 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 C1QCP02747 245 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 MECP2P51608 486 aaKnown RBP13.08□□□□□ -0.32
COL20A1-206ENST00000479501 CCR9P51686 369 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 RPL18Q07020 188 aaKnown RBP13.08□□□□□ -0.32
COL20A1-206ENST00000479501 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
COL20A1-206ENST00000479501 CD300LDQ6UXZ3 194 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 TMPRSS11FQ6ZWK6 438 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 PGAP1Q75T13 922 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF680Q8NEM1 530 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 AP1S3Q96PC3 154 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 DHRS9Q9BPW9 319 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 UQCC2Q9BRT2 126 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 ICOSLGO75144 302 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 RAF1P04049 648 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 GLB1P16278 677 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 AVPI1Q5T686 147 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 ARIH2OSQ8N7S6 290 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 ST7LQ8TDW4 575 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
COL20A1-206ENST00000479501 ACKR4Q9NPB9 350 aa13.08□□□□□ -0.32
COL20A1-206ENST00000479501 PRAMEF25A6NGN4 478 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 FFAR1O14842 300 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 DOK2O60496 412 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 IFNA4P05014 189 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 HOXB5P09067 269 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 DPP4P27487 766 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 FXYD4P59646 89 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF628Q5EBL2 1059 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SPEM1Q8N4L4 309 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SUMF2Q8NBJ7 301 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 OR4C3Q8NH37 302 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF775Q96BV0 537 aaPredicted RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 OR10A2Q9H208 303 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 FKRPQ9H9S5 495 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 CHRNA9Q9UGM1 479 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 KCND3Q9UK17 655 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 COA3Q9Y2R0 106 aaPredicted RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 A0A1W2PS29 197 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SERPINA5P05154 406 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 MSX1P28360 303 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ACKR1Q16570 336 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 TRIM61Q5EBN2 209 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 TMPPEQ6ZT21 453 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ESPNLQ6ZVH7 1005 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 COX15Q7KZN9 410 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 OVCH1Q7RTY7 1134 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SYT9Q86SS6 491 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SCARB1Q8WTV0 552 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 MED18Q9BUE0 208 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF346Q9UL40 294 aaKnown RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SIGLEC7Q9Y286 467 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF705GA8MUZ8 300 aaPredicted RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 G3V3Y1 287 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SCO1O75880 301 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 NME1P15531 152 aaKnown RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 GDF1P27539 372 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SNU13P55769 128 aaKnown RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 CLDN17P56750 224 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 EMC4Q5J8M3 183 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 FIP1L1Q6UN15 594 aaKnown RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SMIM19Q96E16 107 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 C20orf85Q9H1P6 137 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ETV7Q9Y603 341 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 ICAM2P13598 275 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 EIF1P41567 113 aaKnown RBP13.07□□□□□ -0.32
COL20A1-206ENST00000479501 AKR1C2P52895 323 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 P2RX3P56373 397 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 SLC35A1P78382 337 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 CDK5R1Q15078 307 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 FAM57BQ71RH2 274 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 PRSS45Q7RTY3 260 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 DNAAF1Q8NEP3 725 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 DNTTIP1Q9H147 329 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 FBXO34Q9NWN3 711 aa13.07□□□□□ -0.32
COL20A1-206ENST00000479501 A0A0B4J2A0 478 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 FAM230AA0A1W2PPH8 454 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 ZNF705FA8MVS1 300 aaPredicted RBP13.06□□□□□ -0.32
COL20A1-206ENST00000479501 DSCR3O14972 297 aa13.06□□□□□ -0.32
COL20A1-206ENST00000479501 IFNA10P01566 189 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms