RNA–Protein interactions for RNA: ENST00000479256.1

RTKN-208, Transcript of rhotekin, human

TSL 5

Gene RTKN, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTKN-208	ENST00000479256	TNK1	Q13470	666 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	DAG1	Q14118	895 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	TAF11	Q15544	211 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	CLEC12B	Q2HXU8	276 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	CLEC12A	Q5QGZ9	265 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	ADGRG5	Q8IZF4	528 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	SVOPL	Q8N434	492 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	GNPDA2	Q8TDQ7	276 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	ASB9	Q96DX5	294 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	TSSK2	Q96PF2	358 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	ERMAP	Q96PL5	475 aa	Predicted RBP	13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	BTBD10	Q9BSF8	475 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	OR52D1	Q9H346	318 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	MUC13	Q9H3R2	512 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	EGLN3	Q9H6Z9	239 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	STX18	Q9P2W9	335 aa	Known RBP	13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	ARID1A	O14497	2285 aa		13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	HEATR1	Q9H583	2144 aa	Known RBP	13.76	□□□□□ -0.21
RTKN-208	ENST00000479256	PRSS37	A4D1T9	235 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CENPBD1	B2RD01	187 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	XKRY	O14609	159 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	GAST	P01350	101 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SERPINA5	P05154	406 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	MMP7	P09237	267 aa	Predicted RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	ZNF35	P13682	527 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CTLA4	P16410	223 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CCNO	P22674	350 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	APEX1	P27695	318 aa	Known RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	MAGEA2	P43356	314 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	GSS	P48637	474 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CENPA	P49450	140 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	MRPS34	P82930	218 aa	Known RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	HSF2	Q03933	536 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	BNIP1	Q12981	228 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	C3orf36	Q3SXR2	165 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	ANKDD1A	Q495B1	522 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	FAM98B	Q52LJ0	330 aa	Known RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	MTX3	Q5HYI7	312 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	PABPC1L2A	Q5JQF8	200 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	THEM4	Q5T1C6	240 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SLC35F1	Q5T1Q4	408 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	C1QTNF12	Q5T7M4	302 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	TMEM53	Q6P2H8	277 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	PGM2L1	Q6PCE3	622 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SMARCD3	Q6STE5	483 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	LRP11	Q86VZ4	500 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SPATA24	Q86W54	205 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CPEB3	Q8NE35	698 aa	Known RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	OR4F15	Q8NGB8	312 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	OR4K13	Q8NH42	304 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CANT1	Q8WVQ1	401 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	VRK1	Q99986	396 aa	Predicted RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	IFT27	Q9BW83	186 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CHID1	Q9BWS9	393 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CADM1	Q9BY67	442 aa	Known RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SYT4	Q9H2B2	425 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	FN3K	Q9H479	309 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SIAE	Q9HAT2	523 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	CCNB1IP1	Q9NPC3	277 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	NRIP3	Q9NQ35	241 aa		13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.75	□□□□□ -0.21
RTKN-208	ENST00000479256	HIVEP1	P15822	2718 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	FAM171A2	A8MVW0	826 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	GSC2	O15499	205 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	MGRN1	O60291	552 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	SLC16A7	O60669	478 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	DNAJC8	O75937	253 aa	Predicted RBP	13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	CCNB2	O95067	398 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	STAMBP	O95630	424 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	NR4A1	P22736	598 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	FPR3	P25089	353 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	SDHA	P31040	664 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	ERVS71-1	P61550	626 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	ENDOG	Q14249	297 aa	Known RBP	13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	RAB35	Q15286	201 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	SWI5	Q1ZZU3	235 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	RFX4	Q33E94	735 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	SLC36A2	Q495M3	483 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	DNAL1	Q4LDG9	190 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	FAM205BP	Q63HN1	556 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	OR2T5	Q6IEZ7	315 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	C1orf94	Q6P1W5	598 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	PRSS57	Q6UWY2	283 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	DPY19L2P2	Q6ZN68	376 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	AQP11	Q8NBQ7	271 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	ICA1L	Q8NDH6	482 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	SLC30A7	Q8NEW0	376 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	OR2T29	Q8NH02	315 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	SYT3	Q9BQG1	590 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	MAGIX	Q9H6Y5	334 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	COA3	Q9Y2R0	106 aa	Predicted RBP	13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	TEP1	Q99973	2627 aa	Known RBP	13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	MED13L	Q71F56	2210 aa		13.74	□□□□□ -0.21
RTKN-208	ENST00000479256	TMEM129	A0AVI4	362 aa		13.73	□□□□□ -0.21
RTKN-208	ENST00000479256	RNF223	E7ERA6	249 aa		13.73	□□□□□ -0.21
RTKN-208	ENST00000479256	DCTN6	O00399	190 aa		13.73	□□□□□ -0.21
RTKN-208	ENST00000479256	KRT36	O76013	467 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms