RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LRRC40Q9H9A6 602 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 PAK1IP1Q9NWT1 392 aaPredicted RBP2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 Q9UF83 564 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 DNAJC12Q9UKB3 198 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 STAP1Q9ULZ2 295 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 SCML1Q9UN30 329 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 AK6Q9Y3D8 172 aaKnown RBP2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 RP1P56715 2156 aa2.95□□□□□ -1.94
CDC42BPA-212ENST00000478573 MAP1BP46821 2468 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 TRAV26-1A0A087WT03 109 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGHV1OR15-9A0A0B4J2B8 117 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 A0A1B0GWB2 263 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 F5H5T6 163 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 RS1O15537 224 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 SCGNO76038 276 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 LRATO95237 230 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 TPM1P09493 284 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 DBTP11182 482 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 UCHL3P15374 230 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 BCKDHBP21953 392 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCR1P32246 355 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 GRIA1P42261 906 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 PLK1P53350 603 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 ELAVL3Q14576 367 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 SLC25A52Q3SY17 297 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 PTPN20Q4JDL3 420 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 PAGE2BQ5JRK9 111 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 Q6ZPB1 254 aaPredicted RBP2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 TPGS1Q6ZTW0 290 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAM183BPQ6ZVS7 135 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 STRADAQ7RTN6 431 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 TPRA1Q86W33 373 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 VSTM4Q8IW00 320 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMEM123Q8N131 208 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 LRRC75A-AS1Q8N1F1 130 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 DCAF4L2Q8NA75 395 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR51G2Q8NGK0 314 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR2A12Q8NGT7 310 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 UBA3Q8TBC4 463 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 DDI1Q8WTU0 396 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 NT5C3BQ969T7 300 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAM131CQ96AQ9 280 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAF2Q96CS3 445 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 SECISBP2Q96T21 854 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 NPY6RQ99463 290 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCT7Q99832 543 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF670Q9BS34 389 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 DEFB126Q9BYW3 111 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 NAT10Q9H0A0 1025 aaKnown RBP2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 VCX2Q9H322 139 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 LRRN3Q9H3W5 708 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF702PQ9H963 129 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 RAB18Q9NP72 206 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 SLC17A5Q9NRA2 495 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 VNN3Q9NY84 501 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 IL36GQ9NZH8 169 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 COX16Q9P0S2 106 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 OR1A1Q9P1Q5 309 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 GGA2Q9UJY4 613 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 PDE10AQ9Y233 779 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 POLDIP2Q9Y2S7 368 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 PPIAL4AQ9Y536 164 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 KNL1Q8NG31 2342 aa2.94□□□□□ -1.94
CDC42BPA-212ENST00000478573 FAM168BA1KXE4 195 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 LRP5LA4QPB2 252 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 C10orf142B7Z368 130 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SULT2B1O00204 365 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 WWP2O00308 870 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 PES1O00541 588 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 FCN1O00602 326 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 PHOX2AO14813 284 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 YKT6O15498 198 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 PRKYO43930 277 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TBL1XO60907 577 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 ZNF254O75437 659 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CLDN11O75508 207 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CALB1P05937 261 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCDC172P0C7W6 258 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 IGLL1P15814 213 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 POLR2EP19388 210 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 IMPDH1P20839 514 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CSRP1P21291 193 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CALB2P22676 271 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 RDXP35241 583 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 NUDT1P36639 197 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SULT1E1P49888 294 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 PRKXP51817 358 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 EFNB2P52799 333 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 AIF1P55008 147 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CDH4P55283 916 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 RIPPLY3P57055 190 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TPM4P67936 248 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SRSF5Q13243 272 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 HNRNPA1L2Q32P51 320 aaKnown RBP2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TP53I3Q53FA7 332 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 TMEM215Q68D42 235 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 KCNIP4Q6PIL6 250 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 CCDC80Q76M96 950 aa2.93□□□□□ -1.94
CDC42BPA-212ENST00000478573 SETD3Q86TU7 594 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms