RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 MYO9BQ13459 2157 aa0.4□□□□□ -2.35
HPS3-205ENST00000478525 LRP5LA4QPB2 252 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 ZNF726A6NNF4 738 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 GOLGA8SH3BPF8 625 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 LANCL1O43813 399 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 SOX15O60248 233 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 PALMO75781 387 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 IDH1O75874 414 aaKnown RBP0.39□□□□□ -2.35
HPS3-205ENST00000478525 ASGR1P07306 291 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CAPN1P07384 714 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 INAFM2P0DMQ5 153 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 PSMB5P28074 263 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 MPV17P39210 176 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CEACAM6P40199 344 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 RFX3P48380 749 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 ZNF138P52744 262 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CBX3Q13185 183 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 GANABQ14697 944 aaKnown RBP0.39□□□□□ -2.35
HPS3-205ENST00000478525 DPYSL2Q16555 572 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 FAM222AQ5U5X8 452 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CCDC73Q6ZRK6 1079 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 HDDC2Q7Z4H3 204 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 LHFPL3Q86UP9 236 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CDKL3Q8IVW4 592 aaPredicted RBP0.39□□□□□ -2.35
HPS3-205ENST00000478525 SLC35G3Q8N808 338 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CEP112Q8N8E3 955 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 MSANTD4Q8NCY6 345 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 TRPV1Q8NER1 839 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 RSPH1Q8WYR4 309 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 N4BP2L2Q92802 583 aaPredicted RBP0.39□□□□□ -2.35
HPS3-205ENST00000478525 SEH1LQ96EE3 360 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 CLCC1Q96S66 551 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 OMDQ99983 421 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 SPXQ9BT56 116 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 MRPL13Q9BYD1 178 aaKnown RBP0.39□□□□□ -2.35
HPS3-205ENST00000478525 DPH5Q9H2P9 285 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 METTL7AQ9H8H3 244 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 FN3KRPQ9HA64 309 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 NLE1Q9NVX2 485 aaPredicted RBP0.39□□□□□ -2.35
HPS3-205ENST00000478525 BFARQ9NZS9 450 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 MTRRQ9UBK8 725 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 SPASTQ9UBP0 616 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 MOSPD1Q9UJG1 213 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 R4GN34 69 aa0.39□□□□□ -2.35
HPS3-205ENST00000478525 KIF16BQ96L93 1317 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 NCAPD2Q15021 1401 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 RP1L1Q8IWN7 2480 aaPredicted RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 OR6C74A6NCV1 312 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 PCP4L1A6NKN8 68 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 MANBAO00462 879 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 MAPK13O15264 365 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 CLDN3O15551 220 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 ZSCAN12O43309 604 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 MED7O43513 233 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 CHST10O43529 356 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 BCAS2O75934 225 aaPredicted RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 FGF1P05230 155 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 C2P06681 752 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 RAB3BP20337 219 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 ME2P23368 584 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 HRH1P35367 487 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 RPL13AP40429 203 aaKnown RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 YAP1P46937 504 aaKnown RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 ATP1B3P54709 279 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 OR5I1Q13606 314 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 QPRTQ15274 297 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 KLHL38Q2WGJ6 581 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 DMRTC1Q5HYR2 192 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 TTC19Q6DKK2 380 aaPredicted RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 RAET1GQ6H3X3 334 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 APOBEC3HQ6NTF7 200 aaKnown RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 H3F3CQ6NXT2 135 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 KCNIP4Q6PIL6 250 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 SNX20Q7Z614 316 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 ELMOD2Q8IZ81 293 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 ZNF101Q8IZC7 436 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 CENPLQ8N0S6 344 aaPredicted RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 PYROXD1Q8WU10 500 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 SPRYD4Q8WW59 207 aaPredicted RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 NTAN1Q96AB6 310 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 CXorf40BQ96DE9 158 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 MED8Q96G25 268 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 KCNK16Q96T55 309 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 RSG1Q9BU20 258 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 ACAT2Q9BWD1 397 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 EXOSC4Q9NPD3 245 aaKnown RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 ADAP2Q9NPF8 381 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 TAS2R1Q9NYW7 299 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 LAMP5Q9UJQ1 280 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 MCTS1Q9ULC4 181 aaKnown RBP0.38□□□□□ -2.35
HPS3-205ENST00000478525 ATP6V0A2Q9Y487 856 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 ZBED9Q6R2W3 1325 aa0.38□□□□□ -2.35
HPS3-205ENST00000478525 LOXHD1Q8IVV2 1947 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 PNPLA6Q8IY17 1366 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 ARHGEF35A5YM69 484 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 HSD17B6O14756 317 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 NVLO15381 856 aaKnown RBP0.37□□□□□ -2.35
HPS3-205ENST00000478525 OR1F1O43749 312 aa0.37□□□□□ -2.35
HPS3-205ENST00000478525 CDC40O60508 579 aaKnown RBP eCLIP0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms