RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
PRPF39-203ENST00000477626 KLHL15Q96M94 604 aa10.75□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF385AQ96PM9 386 aaKnown RBP10.75□□□□□ -0.69
PRPF39-203ENST00000477626 DERL3Q96Q80 235 aa10.75□□□□□ -0.69
PRPF39-203ENST00000477626 INTS14Q96SY0 518 aa10.75□□□□□ -0.69
PRPF39-203ENST00000477626 RNF122Q9H9V4 155 aa10.75□□□□□ -0.69
PRPF39-203ENST00000477626 H2AFY2Q9P0M6 372 aaPredicted RBP10.75□□□□□ -0.69
PRPF39-203ENST00000477626 RIF1Q5UIP0 2472 aaKnown RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 NKX2-8O15522 239 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF254O75437 659 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 LGALS3BPQ08380 585 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 TMEM176BQ3YBM2 270 aaPredicted RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 LRRC69Q6ZNQ3 347 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 SIAH3Q8IW03 269 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 GHDCQ8N2G8 530 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 TMEM203Q969S6 136 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 DDX28Q9NUL7 540 aaKnown RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 COA3Q9Y2R0 106 aaPredicted RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 LOC100506127A0A0U1RQW1 187 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 TTLL8A6PVC2 850 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 TNFSF11O14788 317 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 IGHG3P01860 377 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 HIST1H2ABP04908 130 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 TNFSF10P50591 281 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 MRPL28Q13084 256 aaKnown RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 ENDOGQ14249 297 aaKnown RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 IGFL3Q6UXB1 125 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 Q6ZNX1 250 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 HIST3H2AQ7L7L0 130 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 HIST1H2ACQ93077 130 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 C4orf45Q96LM5 186 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 OR5B2Q96R09 309 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 PPP1R3EQ9H7J1 279 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 OR5H15A6NDH6 313 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 TVP23AA6NH52 213 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 SLC16A7O60669 478 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 WISP2O76076 250 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 RENP00797 406 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 CD40LGP29965 261 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 RPS27P42677 84 aaKnown RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 BIDP55957 195 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 BCL2A1Q16548 175 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 DNM1P46Q6ZS02 220 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 DPY19L4Q7Z388 723 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 ABHD6Q9BV23 337 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 HDHD5Q9BXW7 423 aa10.74□□□□□ -0.69
PRPF39-203ENST00000477626 SRA1Q9HD15 236 aaKnown RBP10.74□□□□□ -0.69
PRPF39-203ENST00000477626 FAM186AA6NE01 2351 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 DSPP15924 2871 aaKnown RBP10.73□□□□□ -0.69
PRPF39-203ENST00000477626 A0A1B0GTH9 108 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 E9PLN8 166 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 LINC01387J3KSC0 135 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 HLA-DPB1P04440 258 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ADRA2CP18825 462 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ENPP1P22413 925 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 CRABP1P29762 137 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 SERPINB10P48595 397 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 BLVRAP53004 296 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 DCTN2Q13561 401 aaKnown RBP10.73□□□□□ -0.69
PRPF39-203ENST00000477626 LIPNQ5VXI9 398 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 CFAP77Q6ZQR2 320 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 KRT74Q7RTS7 529 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 PARP16Q8N5Y8 322 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 TMEM156Q8N614 296 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 TMEM251Q8N6I4 163 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 OR2G2Q8NGZ5 317 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ASB17Q8WXJ9 295 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 FER1L6-AS2Q96M78 137 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 TMED9Q9BVK6 235 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 TMEM185BQ9H7F4 350 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF224Q9NZL3 707 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 LIPGQ9Y5X9 500 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 DCDC2BA2VCK2 349 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 J3QLW9 94 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF593O00488 134 aaPredicted RBP10.73□□□□□ -0.69
PRPF39-203ENST00000477626 CTDSP2O14595 271 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF19P17023 458 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 EDNRAP25101 427 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 APEX1P27695 318 aaKnown RBP10.73□□□□□ -0.69
PRPF39-203ENST00000477626 GDI2P50395 445 aaKnown RBP10.73□□□□□ -0.69
PRPF39-203ENST00000477626 STK11Q15831 433 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 YIF1BQ5BJH7 314 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 OTPQ5XKR4 325 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ESPNLQ6ZVH7 1005 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 VASH2Q86V25 355 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF679Q8IYX0 411 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 BORCS5Q969J3 196 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 KCTD7Q96MP8 289 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 SSR3Q9UNL2 185 aa10.73□□□□□ -0.69
PRPF39-203ENST00000477626 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
PRPF39-203ENST00000477626 CD8B2A6NJW9 211 aa10.72□□□□□ -0.69
PRPF39-203ENST00000477626 PHYHO14832 338 aa10.72□□□□□ -0.69
PRPF39-203ENST00000477626 GPRIN2O60269 458 aa10.72□□□□□ -0.69
PRPF39-203ENST00000477626 P04436 131 aa10.72□□□□□ -0.69
PRPF39-203ENST00000477626 CD8BP10966 210 aa10.72□□□□□ -0.69
PRPF39-203ENST00000477626 CCL1P22362 96 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms