RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PRSS44E7EML9 344 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 PRR23D1E9PI22 279 aaPredicted RBP13.44□□□□□ -0.26
SEC13-215ENST00000477547 DCTN6O00399 190 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 PRKYO43930 277 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 KHDRBS3O75525 346 aaKnown RBP13.44□□□□□ -0.26
SEC13-215ENST00000477547 PRR23D2P0DMB1 279 aaPredicted RBP13.44□□□□□ -0.26
SEC13-215ENST00000477547 CRABP1P29762 137 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 PCYT1AP49585 367 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 AQP4P55087 323 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 DBPQ10586 325 aaPredicted RBP13.44□□□□□ -0.26
SEC13-215ENST00000477547 PLBD1Q6P4A8 553 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 ZNF813Q6ZN06 617 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 PROKR2Q8NFJ6 384 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 STEAP2Q8NFT2 490 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 OR2T4Q8NH00 348 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 CYGBQ8WWM9 190 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 HTRA1Q92743 480 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 S100PBPQ96BU1 408 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 HRASLS5Q96KN8 279 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 FOXN4Q96NZ1 517 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 ADI1Q9BV57 179 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 RACGAP1Q9H0H5 632 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 MED20Q9H944 212 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 HINT3Q9NQE9 182 aaKnown RBP13.44□□□□□ -0.26
SEC13-215ENST00000477547 TMEM38BQ9NVV0 291 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 GMPPBQ9Y5P6 360 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 FKBP7Q9Y680 259 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 PRR14LQ5THK1 2151 aa13.44□□□□□ -0.26
SEC13-215ENST00000477547 A0A096LPE4 126 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 IGLV1-36A0A0B4J1U3 117 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 A0A1W2PPZ6 126 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 C19orf84I3L1E1 186 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 GYPBP06028 91 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 SPI1P17947 270 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 CDAP32320 146 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 PYCR1P32322 319 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 CENPAP49450 140 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 SLC25A1P53007 311 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 ETFDHQ16134 617 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 GABRA6Q16445 453 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 TBRG1Q3YBR2 411 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 HIKESHIQ53FT3 197 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 SP5Q6BEB4 398 aaPredicted RBP13.43□□□□□ -0.26
SEC13-215ENST00000477547 OR7E24Q6IFN5 339 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 ANKRD16Q6P6B7 361 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 CXXC5Q7LFL8 322 aaKnown RBP13.43□□□□□ -0.26
SEC13-215ENST00000477547 OR6V1Q8N148 313 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 C17orf78Q8N4C9 275 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 TCEANCQ8N8B7 351 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 DDOQ99489 341 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 HCAR1Q9BXC0 346 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 HDHD5Q9BXW7 423 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 NMNAT2Q9BZQ4 307 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 FAM118AQ9NWS6 357 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 NDRG4Q9ULP0 352 aaKnown RBP13.43□□□□□ -0.26
SEC13-215ENST00000477547 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
SEC13-215ENST00000477547 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 OR5H1A6NKK0 313 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 E9PQ18 207 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 CLUP10909 449 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 VHLP40337 213 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 MRPS34P82930 218 aaKnown RBP13.42□□□□□ -0.26
SEC13-215ENST00000477547 SNTB1Q13884 538 aaKnown RBP13.42□□□□□ -0.26
SEC13-215ENST00000477547 KEAP1Q14145 624 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 SNCBQ16143 134 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 FOXL2NBQ6ZUU3 175 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 ZBTB46Q86UZ6 589 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 CPOQ8IVL8 374 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 DHRSXQ8N5I4 330 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 OR6K6Q8NGW6 343 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 TMEM163Q8TC26 289 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 IL4I1Q96RQ9 567 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 OR10A4Q9H209 315 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 SEC61A2Q9H9S3 476 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 SRA1Q9HD15 236 aaKnown RBP13.42□□□□□ -0.26
SEC13-215ENST00000477547 B9D1Q9UPM9 204 aa13.42□□□□□ -0.26
SEC13-215ENST00000477547 COA3Q9Y2R0 106 aaPredicted RBP13.42□□□□□ -0.26
SEC13-215ENST00000477547 FAM171A2A8MVW0 826 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 SLC16A6O15403 523 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 FARS2O95363 451 aaKnown RBP13.41□□□□□ -0.26
SEC13-215ENST00000477547 GPANK1O95872 356 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 GAAP10253 952 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 PPP3CBP16298 524 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 MSR1P21757 451 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 LAP3P28838 519 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 CAPGP40121 348 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 CAPZA2P47755 286 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 UBE2NP61088 152 aaKnown RBP13.41□□□□□ -0.26
SEC13-215ENST00000477547 GLO1Q04760 184 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 NRN1LQ496H8 165 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 KLHL12Q53G59 568 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 ZNF627Q7L945 461 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.41□□□□□ -0.26
SEC13-215ENST00000477547 GLB1L2Q8IW92 636 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 DEPDC4Q8N2C3 294 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 SLC22A24Q8N4F4 322 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 BBS1Q8NFJ9 593 aa13.41□□□□□ -0.26
SEC13-215ENST00000477547 OR51L1Q8NGJ5 315 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms