RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 M0R1B8 84 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SLC16A7O60669 478 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SEC14L2O76054 403 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 PTHP01270 115 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 IGKV3-15P01624 115 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 IGLV1-44P01699 117 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 TP53P04637 393 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-205ENST00000477508 HMGN1P05114 100 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 CD79AP11912 226 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 CD40P25942 277 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 LOXP28300 417 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-205ENST00000477508 GRK5P34947 590 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 GIPRP48546 466 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 DAPP51397 102 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 PCBD1P61457 104 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 LCN6P62502 163 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 ESRRGP62508 458 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 BSPH1Q075Z2 132 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SGCAQ16586 387 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SLC35F1Q5T1Q4 408 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 ADAM5Q6NVV9 412 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 TMEM53Q6P2H8 277 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 LEG1Q6P5S2 330 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 PTCHD4Q6ZW05 846 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SLC16A14Q7RTX9 510 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SYT9Q86SS6 491 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 GLB1L2Q8IW92 636 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SKA3Q8IX90 412 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 OR52E2Q8NGJ4 325 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 OR4K13Q8NH42 304 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SLC38A2Q96QD8 506 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 NMNAT3Q96T66 252 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 PKP2Q99959 881 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 RBM4BQ9BQ04 359 aaKnown RBP11.45□□□□□ -0.58
TOP3A-205ENST00000477508 KCNS3Q9BQ31 491 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 RBM4Q9BWF3 364 aaKnown RBP11.45□□□□□ -0.58
TOP3A-205ENST00000477508 PLA2G12AQ9BZM1 189 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 SEC61A2Q9H9S3 476 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 KRT84Q9NSB2 600 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 NPAP1Q9NZP6 1156 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 OAZ3Q9UMX2 235 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 FKBP7Q9Y680 259 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 CADP27708 2225 aa11.45□□□□□ -0.58
TOP3A-205ENST00000477508 IGKV1D-43A0A0B4J1Z2 117 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 A0A1W2PPL8 197 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 RIIAD1A6NNX1 92 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 C12orf71A8MTZ7 269 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 RAB36O95755 333 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 HLA-HP01893 362 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 CRYAAP02489 173 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 CST2P09228 141 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 CTLA4P16410 223 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF3P17036 446 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 MSR1P21757 451 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 POU1F1P28069 291 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 LAP3P28838 519 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 PTDSS1P48651 473 aaKnown RBP11.44□□□□□ -0.58
TOP3A-205ENST00000477508 RAB1AP62820 205 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 GLO1Q04760 184 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.44□□□□□ -0.58
TOP3A-205ENST00000477508 PGGHGQ32M88 737 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 KDM4DQ6B0I6 523 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 ZNF704Q6ZNC4 412 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-205ENST00000477508 MDP1Q86V88 176 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 PQLC1Q8N2U9 271 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 NPEPL1Q8NDH3 523 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 ICA1LQ8NDH6 482 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 OR2T4Q8NH00 348 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 OR4Q3Q8NH05 313 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 NABP1Q96AH0 204 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 LURAP1Q96LR2 239 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 SH3GL3Q99963 347 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 C1QTNF6Q9BXI9 259 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 PRRG3Q9BZD7 231 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 NUAK2Q9H093 628 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 RACGAP1Q9H0H5 632 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 SEMA6AQ9H2E6 1030 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 C1orf198Q9H425 327 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 CMC2Q9NRP2 79 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 SPG11Q96JI7 2443 aa11.44□□□□□ -0.58
TOP3A-205ENST00000477508 ROS1P08922 2347 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 TACC2O95359 2948 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 IGHV1-18A0A0C4DH31 117 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 OR6C68A6NDL8 312 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 C3orf80F5H4A9 247 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 ABCD4O14678 606 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 IGFBP1P08833 259 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-205ENST00000477508 PAICSP22234 425 aaKnown RBP11.43□□□□□ -0.58
TOP3A-205ENST00000477508 CDAP32320 146 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 CENPAP49450 140 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 BLVRAP53004 296 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 SLC25A1P53007 311 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 CRISP1P54107 249 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 LSM6P62312 80 aaKnown RBP11.43□□□□□ -0.58
TOP3A-205ENST00000477508 TUBA1BP68363 451 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 TUBA4AP68366 448 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 CDK5Q00535 292 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 PLP2Q04941 152 aa11.43□□□□□ -0.58
TOP3A-205ENST00000477508 PIGFQ07326 219 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms