RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 CCNB2O95067 398 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SNAP29O95721 258 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 RAB36O95755 333 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SERPINA5P05154 406 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SOD3P08294 240 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF14P17017 642 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 GSTM3P21266 225 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 RPL4P36578 427 aaKnown RBP10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 ACVR1BP36896 505 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 PTDSS1P48651 473 aaKnown RBP10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 PTH2RP49190 550 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 EVX1P49640 407 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 RPS6KA3P51812 740 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 ARHGDIAP52565 204 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 PCBD1P61457 104 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 RAB1AP62820 205 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 NKX6-1P78426 367 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 COX10Q12887 443 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 EFNB3Q15768 340 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 RFX4Q33E94 735 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 TMEM53Q6P2H8 277 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SHQ1Q6PI26 577 aaKnown RBP10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 CD300LDQ6UXZ3 194 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 TMEM179BQ7Z7N9 219 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 MDP1Q86V88 176 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 HIPK1Q86Z02 1210 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 PQLC1Q8N2U9 271 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 MUC15Q8N387 334 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SVOPLQ8N434 492 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 OR52J3Q8NH60 311 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 OR5K1Q8NHB7 308 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 GNPDA2Q8TDQ7 276 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 TSPAN32Q96QS1 320 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 OSBPL10Q9BXB5 764 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 DGCR6LQ9BY27 220 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 KCNN2Q9H2S1 579 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 DCLRE1BQ9H816 532 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 VSX1Q9NZR4 365 aaPredicted RBP10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 POU2F3Q9UKI9 436 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 ITGB1BP2Q9UKP3 347 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SPEF1Q9Y4P9 236 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 UGT2A1Q9Y4X1 527 aa10.74□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC22A23A1A5C7 686 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 H7C417 338 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 HLA-HP01893 362 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 CST2P09228 141 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF35P13682 527 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 ANXA8P13928 327 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF26P17031 533 aaPredicted RBP10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC6A6P31641 620 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 CAPZA2P47755 286 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 RPS23P62266 143 aaKnown RBP10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 ADAM8P78325 824 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 CD47Q08722 323 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 RIPK1Q13546 671 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 C11orf71Q6IPW1 123 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 PGBD2Q6P3X8 592 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 LURAP1LQ8IV03 231 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 SKA3Q8IX90 412 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 SYT14Q8NB59 555 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 OR1J2Q8NGS2 313 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 GIPC3Q8TF64 312 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 DNAJC9Q8WXX5 260 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF570Q96NI8 536 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 PKP2Q99959 881 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 GABARAPL1Q9H0R8 117 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 CA10Q9NS85 328 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 IL20Q9NYY1 176 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 LAMP3Q9UQV4 416 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 DSCAMO60469 2012 aa10.73□□□□□ -0.69
CLCNKA-205ENST00000477360 ARID1AO14497 2285 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 IGHV2OR16-5A0A0B4J2B6 119 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF503-AS2A6NEH8 195 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 C12orf71A8MTZ7 269 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 B9A039 149 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 ATP6V1G2-DDX39BF2Z307 99 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 ICMTO60725 284 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 E2F6O75461 281 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 CD8AP01732 235 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 MMP7P09237 267 aaPredicted RBP10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 CD79AP11912 226 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 NR4A1P22736 598 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 PCSK6P29122 969 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 GLRXP35754 106 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 GIPRP48546 466 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 FABP6P51161 128 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 IDH3GP51553 393 aaPredicted RBP10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 FXYD6P3P58550 94 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 ERVK-25P63136 954 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 PLP2Q04941 152 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 PPP1R8Q12972 351 aaKnown RBP10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 DNM1P34Q6PK57 102 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 UNQ6126/PRO20091Q6UXV3 157 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 ZNF620Q6ZNG0 422 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 RASSF6Q6ZTQ3 369 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 SLC16A14Q7RTX9 510 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 AMIGO2Q86SJ2 522 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 KRTAP1-3Q8IUG1 177 aa10.72□□□□□ -0.69
CLCNKA-205ENST00000477360 ZDHHC13Q8IUH4 622 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms