RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PLK5Q496M5 336 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 OLIG3Q7RTU3 272 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 GJC3Q8NFK1 279 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 OR51H1Q8NH63 302 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 FAM122AQ96E09 287 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 NAA50Q9GZZ1 169 aaKnown RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 KIR3DX1Q9H7L2 352 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 ZBTB42B2RXF5 422 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 H0Y8X5 98 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 ENTHD1Q8IYW4 607 aa17.07■□□□□ 0.32
VARS2-209ENST00000477288 PHF7Q9BWX1 381 aaPredicted RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 MKRN2Q9H000 416 aaKnown RBP17.07■□□□□ 0.32
VARS2-209ENST00000477288 PRRC2BQ5JSZ5 2229 aaKnown RBP17.06■□□□□ 0.32
VARS2-209ENST00000477288 ZNF701M0R085 212 aaPredicted RBP17.06■□□□□ 0.32
VARS2-209ENST00000477288 T-ENOLP0DO92 83 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 GRB2P62993 217 aaKnown RBP17.06■□□□□ 0.32
VARS2-209ENST00000477288 DEFB109BQ30KR1 87 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 NKAIN1Q4KMZ8 207 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 UBE2ZQ9H832 354 aaPredicted RBP17.06■□□□□ 0.32
VARS2-209ENST00000477288 TAS2R5Q9NYW4 299 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 GAB2Q9UQC2 676 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 MYH8P13535 1937 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 SMLR1H3BR10 107 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 ELK1P19419 428 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 ADPRHP54922 357 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 OR10J5Q8NHC4 309 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 GPR173Q9NS66 373 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 KLKB1P03952 638 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 THBS1P07996 1170 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 OR13C7P0DN81 318 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 P2RX3P56373 397 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 UBE2G1P62253 170 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 PLAC9Q5JTB6 97 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 SSX9Q7RTT3 188 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 BANF2Q9H503 90 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 CSO75390 466 aaKnown RBP17.06■□□□□ 0.32
VARS2-209ENST00000477288 HNF1AP20823 631 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 CCR6P51684 374 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 SOHLH1Q5JUK2 328 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 ABHD17CQ6PCB6 329 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 H1FNTQ75WM6 255 aaPredicted RBP17.06■□□□□ 0.32
VARS2-209ENST00000477288 NRARPQ7Z6K4 114 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 A4GALTQ9NPC4 353 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 MYO10Q9HD67 2058 aa17.06■□□□□ 0.32
VARS2-209ENST00000477288 CLDN24A6NM45 220 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 KIAA1024LP59773 190 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 WFDC8Q8IUA0 241 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 UBTD2Q8WUN7 234 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 TMEM43Q9BTV4 400 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 DHRS4Q9BTZ2 278 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 POFUT1Q9H488 388 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 COA3Q9Y2R0 106 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 C4orf47A7E2U8 309 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 RPS23P62266 143 aaKnown RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 ZNF266Q14584 549 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 CCSMST1Q4G0I0 132 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 NXNL2Q5VZ03 156 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 THNSL2Q86YJ6 484 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 FAM3DQ96BQ1 224 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 RTL8AQ9BWD3 113 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 M0R1B8 84 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 CR2P20023 1033 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 FCER1GP30273 86 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 MAP2K6P52564 334 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 HMGN3Q15651 99 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 Q6ZRG5 221 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 SIAH3Q8IW03 269 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 MAML2Q8IZL2 1156 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 OR4Q3Q8NH05 313 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 RIMS4Q9H426 269 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 TUBB1Q9H4B7 451 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 CGGBP1Q9UFW8 167 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 GPR55Q9Y2T6 319 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 PAPLNO95428 1278 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 ZIC5Q96T25 663 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 PARP12Q9H0J9 701 aaKnown RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 PLEKHF2Q9H8W4 249 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 MYH3P11055 1940 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 MAGEB4O15481 346 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 IL2RAP01589 272 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 PIPP12273 146 aaPredicted RBP17.05■□□□□ 0.32
VARS2-209ENST00000477288 ACKR3P25106 362 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 HTR4Q13639 388 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 PFN4Q8NHR9 129 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 NIPSNAP3BQ9BS92 247 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 KCNIP2Q9NS61 270 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 TIAM2Q8IVF5 1701 aa17.05■□□□□ 0.32
VARS2-209ENST00000477288 LOC100289279A0A1B0GTE1 492 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 LGI1O95970 557 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 CSN1S1P47710 185 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 MFSD12Q6NUT3 480 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 ANGPTL5Q86XS5 388 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 OR51A4Q8NGJ6 313 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 OR51A2Q8NGJ7 313 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 OR10X1Q8NGY0 326 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 SEMA4CQ9C0C4 833 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 MUTYHQ9UIF7 546 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 TRGV8A0A0C4DH27 118 aa17.04■□□□□ 0.32
VARS2-209ENST00000477288 SUB1P53999 127 aaKnown RBP eCLIP17.04■□□□□ 0.323e-6■■■■□ 22.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms