RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 BOD1L2Q8IYS8 172 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CMTM1Q8IZ96 169 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PGBD5Q8N414 524 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SLC44A3Q8N4M1 653 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 KIR3DL3Q8N743 410 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RELL2Q8NC24 303 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SLC37A3Q8NCC5 494 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ATP6V1C2Q8NEY4 427 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR4D9Q8NGE8 314 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR5T2Q8NGG2 359 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR56A4Q8NGH8 313 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR4D10Q8NGI6 311 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR5D18Q8NGL1 313 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR6Q1Q8NGQ2 317 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR1B1Q8NGR6 318 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OR4Q3Q8NH05 313 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OLIG1Q8TAK6 271 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ACER1Q8TDN7 264 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SETD7Q8WTS6 366 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TCTEX1D2Q8WW35 142 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TFGQ92734 400 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RORBQ92753 470 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 DACT3Q96B18 629 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 OMA1Q96E52 524 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PDLIM2Q96JY6 352 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 NEDD4LQ96PU5 975 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 KCNA7Q96RP8 456 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CYP2S1Q96SQ9 504 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 LGMNQ99538 433 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 UTP23Q9BRU9 249 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TRIM51Q9BSJ1 452 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM121Q9BTD3 319 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CABLES2Q9BTV7 478 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PAPOLGQ9BWT3 736 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 IKZF5Q9H5V7 419 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 REEP4Q9H6H4 257 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 C11orf49Q9H6J7 331 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 WDR55Q9H6Y2 383 aaPredicted RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 FOLH1BQ9HBA9 442 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 HRASLSQ9HDD0 168 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SIRT7Q9NRC8 400 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZFP57Q9NU63 452 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 MCUBQ9NWR8 336 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 RMND1Q9NWS8 449 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 MAT2BQ9NZL9 334 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CCDC59Q9P031 241 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 PDE10AQ9Y233 779 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 LRRC42Q9Y546 428 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 MRC1P22897 1456 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF831Q5JPB2 1677 aa2.49□□□□□ -2.01
HMGN4-202ENST00000477243 SPTBN1Q01082 2364 aaKnown RBP2.49□□□□□ -2.01
HMGN4-202ENST00000477243 CACNA1SQ13698 1873 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 RALGAPA2Q2PPJ7 1873 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 MAP2P11137 1827 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 A0A087WZ39 114 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 TRBV7-9A0A0J9YWB2 115 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 CENPVL1A0A0U1RR11 272 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 TCRBV9S1A1TA0A576 114 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 TSPAN11A1L157 253 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 HIDE1A8MVS5 230 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 LMO7DNF2Z398 122 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 H0YJX3 145 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 H3BNH8 94 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 hCG_2039718K7EN88 272 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 PDHXO00330 501 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 PLPP3O14495 311 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 TNFSF11O14788 317 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 SLC31A1O15431 190 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 XPNPEP2O43895 674 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 NADKO95544 446 aaPredicted RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 ESRRBO95718 433 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 TSPAN15O95858 294 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 IFNA5P01569 189 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 C2P06681 752 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 GP1BAP07359 652 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 IGHV4-30-4P0DP06 118 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 PRB4P10163 310 aaPredicted RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 CTRB1P17538 263 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 POLR2EP19388 210 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 COX5AP20674 150 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 ATP6V1B2P21281 511 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 NR4A1P22736 598 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 ACRV1P26436 265 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 CFPP27918 469 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 CALCRP30988 508 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 SAA4P35542 130 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 CEACAM3P40198 252 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 TSFMP43897 325 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 IDH2P48735 452 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 DAP3P51398 398 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 MNAT1P51948 309 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 HNRNPA3P51991 378 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 KPNA2P52292 529 aaKnown RBP2.48□□□□□ -2.01
HMGN4-202ENST00000477243 CDH11P55287 796 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 PKNOX1P55347 436 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 FBXW4P57775 412 aa2.48□□□□□ -2.01
HMGN4-202ENST00000477243 RAB4BP61018 213 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms