RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 NDUFB2O95178 105 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 OR4A8P0C604 315 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 CCL2P13500 99 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 FPR3P25089 353 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 RPL4P36578 427 aaKnown RBP11.79□□□□□ -0.52
RAB5A-208ENST00000476544 TNK1Q13470 666 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 ENDOGQ14249 297 aaKnown RBP11.79□□□□□ -0.52
RAB5A-208ENST00000476544 SGCAQ16586 387 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 DPY19L2P2Q6ZN68 376 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 TMEM179BQ7Z7N9 219 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 LRRC18Q8N456 261 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 IL17RDQ8NFM7 739 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 OR4F15Q8NGB8 312 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 CANT1Q8WVQ1 401 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 CCDC124Q96CT7 223 aaKnown RBP11.79□□□□□ -0.52
RAB5A-208ENST00000476544 RBP7Q96R05 134 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 CHID1Q9BWS9 393 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 TRIM15Q9C019 465 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 MUC13Q9H3R2 512 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
RAB5A-208ENST00000476544 MAGIXQ9H6Y5 334 aa11.79□□□□□ -0.52
RAB5A-208ENST00000476544 TEX13CA0A0J9YWL9 993 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 PRSS37A4D1T9 235 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 A6NIZ1 184 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 H7C1Q1 480 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 GPRIN2O60269 458 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 OR10H3O60404 316 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 KRT36O76013 467 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 LY6HO94772 140 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 UBL3O95164 117 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 MPZL1O95297 269 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 TP53P04637 393 aaPredicted RBP11.78□□□□□ -0.52
RAB5A-208ENST00000476544 FOSL1P15407 271 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 CTLA4P16410 223 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 LAP3P28838 519 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 RAP1BP61224 184 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 RAP1AP62834 184 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 PSG4Q00888 419 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 CD47Q08722 323 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 MTX3Q5HYI7 312 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 VHLLQ6RSH7 139 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 SMARCD3Q6STE5 483 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 LRP11Q86VZ4 500 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 ZCCHC24Q8N2G6 241 aaKnown RBP11.78□□□□□ -0.52
RAB5A-208ENST00000476544 OR9Q2Q8NGE9 314 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 GNPDA2Q8TDQ7 276 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 NANOS1Q8WY41 292 aaKnown RBP11.78□□□□□ -0.52
RAB5A-208ENST00000476544 SLCO4A1Q96BD0 722 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 SAMD8Q96LT4 415 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 WNT5BQ9H1J7 359 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 MOV10Q9HCE1 1003 aaKnown RBP11.78□□□□□ -0.52
RAB5A-208ENST00000476544 VSX1Q9NZR4 365 aaPredicted RBP11.78□□□□□ -0.52
RAB5A-208ENST00000476544 STX18Q9P2W9 335 aaKnown RBP11.78□□□□□ -0.52
RAB5A-208ENST00000476544 GRHPRQ9UBQ7 328 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 AURKCQ9UQB9 309 aa11.78□□□□□ -0.52
RAB5A-208ENST00000476544 RTTNQ86VV8 2226 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 LOC100509620A0A075B734 347 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 H7C417 338 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 TNFRSF11BO00300 401 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 ARPC3O15145 178 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 GYG2O15488 501 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 AHCYL1O43865 530 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 PPP1R3DO95685 299 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 GPANK1O95872 356 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 APEHP13798 732 aaKnown RBP11.77□□□□□ -0.53
RAB5A-208ENST00000476544 ZNF32P17041 273 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 SDHAP31040 664 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 ZNF84P51523 738 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 TSPAN31Q12999 210 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 EFNB3Q15768 340 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 PABPC1L2AQ5JQF8 200 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 FAM205BPQ63HN1 556 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 GPR139Q6DWJ6 353 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 OR2T5Q6IEZ7 315 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 KRT80Q6KB66 452 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 SLC16A14Q7RTX9 510 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 HDDC2Q7Z4H3 204 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 OR10H5Q8NGA6 315 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 OR2T29Q8NH02 315 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 TRMT61AQ96FX7 289 aaKnown RBP11.77□□□□□ -0.53
RAB5A-208ENST00000476544 C18orf12Q96KH6 178 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 COX4I2Q96KJ9 171 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 TSSK2Q96PF2 358 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 OR52D1Q9H346 318 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 ZNF442Q9H7R0 627 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 FAIMQ9NVQ4 179 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 POMPQ9Y244 141 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 ZFHX3Q15911 3703 aa11.77□□□□□ -0.53
RAB5A-208ENST00000476544 MED13LQ71F56 2210 aa11.76□□□□□ -0.53
RAB5A-208ENST00000476544 A0A096LNT2 108 aa11.76□□□□□ -0.53
RAB5A-208ENST00000476544 TCRBV3S1A0A5B6 114 aa11.76□□□□□ -0.53
RAB5A-208ENST00000476544 AQP12BA6NM10 295 aa11.76□□□□□ -0.53
RAB5A-208ENST00000476544 SOCS2O14508 198 aa11.76□□□□□ -0.53
RAB5A-208ENST00000476544 NPR2P20594 1047 aa11.76□□□□□ -0.53
RAB5A-208ENST00000476544 APEX1P27695 318 aaKnown RBP11.76□□□□□ -0.53
RAB5A-208ENST00000476544 CHRNB3Q05901 458 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms