RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 FOXL2NBQ6ZUU3 175 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 TMPRSS11FQ6ZWK6 438 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 SLC16A14Q7RTX9 510 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 OAFQ86UD1 273 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 PGAM4Q8N0Y7 254 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 GTF3AQ92664 365 aaKnown RBP12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 Q96M85 177 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 FOXN4Q96NZ1 517 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 SOX7Q9BT81 388 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 BPESC1Q9GZL8 116 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 SMURF2Q9HAU4 748 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 IL20RAQ9UHF4 553 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 TAGLN3Q9UI15 199 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 ARL2BPQ9Y2Y0 163 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 FKBP7Q9Y680 259 aa12.12□□□□□ -0.47
SLC6A8-209ENST00000476466 CRLF1O75462 422 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 NCR1O76036 304 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 CLPTM1O96005 669 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 H1F0P07305 194 aaKnown RBP12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 IGHV4-31P0DP07 118 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 BMP4P12644 408 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 ZNF16P17020 682 aaPredicted RBP12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 ZNF32P17041 273 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 WNT5AP41221 380 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 NR4A2P43354 598 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 PDLIM4P50479 330 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 ZNF84P51523 738 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 ENDOGQ14249 297 aaKnown RBP12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 CARTPTQ16568 116 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 NRN1LQ496H8 165 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 PABPC1L2AQ5JQF8 200 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 FGD3Q5JSP0 725 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 UGT2A3Q6UWM9 527 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 RNF113BQ8IZP6 322 aaKnown RBP12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 AKR7LQ8NHP1 331 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 RASD2Q96D21 266 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 CDRT15Q96T59 188 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 ALG12Q9BV10 488 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 ANKRD19PQ9H560 264 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 DENND2DQ9H6A0 471 aaPredicted RBP12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 GORASP2Q9H8Y8 452 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 RPS6KA6Q9UK32 745 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 SIGLEC7Q9Y286 467 aa12.11□□□□□ -0.47
SLC6A8-209ENST00000476466 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.1□□□□□ -0.473e-7■□□□□ 8.3
SLC6A8-209ENST00000476466 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 PTP4A3O75365 173 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 SNAP29O95721 258 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 CD14P08571 375 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 CSF3P09919 207 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 RHCEP18577 417 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 ATP6V1B2P21281 511 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 USF1P22415 310 aaPredicted RBP12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 LAP3P28838 519 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 IL2RGP31785 369 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 GGTLC2Q14390 218 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 ELFN2Q5R3F8 820 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 HDDC2Q7Z4H3 204 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 ZNF101Q8IZC7 436 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 DEFB107AQ8IZN7 70 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 ARIH2OSQ8N7S6 290 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 OR52J3Q8NH60 311 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 LRRC37BQ96QE4 947 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 RNF121Q9H920 327 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 SIAEQ9HAT2 523 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 SLC7A8Q9UHI5 535 aa12.1□□□□□ -0.47
SLC6A8-209ENST00000476466 SLC22A23A1A5C7 686 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 SYNGR3O43761 229 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 STAMBPO95630 424 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 HPXP02790 462 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 NAT2P11245 290 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 DAOP14920 347 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 CTLA4P16410 223 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 IFNA8P32881 189 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 PPP2R2BQ00005 443 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 PSG4Q00888 419 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 HNRNPA0Q13151 305 aaKnown RBP12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 TAF11Q15544 211 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 TRIP10Q15642 601 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 SGCAQ16586 387 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 SLC36A2Q495M3 483 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 ZBED5Q49AG3 693 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 GKAP1Q5VSY0 366 aaPredicted RBP12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 TMEM53Q6P2H8 277 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 PTCHD4Q6ZW05 846 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 PYURFQ96I23 114 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 RSRC1Q96IZ7 334 aaKnown RBP12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 POM121L2Q96KW2 1035 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 CCT8L2Q96SF2 557 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 RAB1BQ9H0U4 201 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 EMC7Q9NPA0 242 aa12.09□□□□□ -0.47
SLC6A8-209ENST00000476466 STX18Q9P2W9 335 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms