RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NSL1Q96IY1 281 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 SORCS2Q96PQ0 1159 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 SH3GL3Q99963 347 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 KCNN2Q9H2S1 579 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 PLK3Q9H4B4 646 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF442Q9H7R0 627 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 RNF121Q9H920 327 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 SMURF2Q9HAU4 748 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 CDC42EP3Q9UKI2 254 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 AURKCQ9UQB9 309 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 SPEF1Q9Y4P9 236 aa14□□□□□ -0.17
COL1A1-205ENST00000476387 VWC2LB2RUY7 222 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 CDC42EP2O14613 210 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 LY6HO94772 140 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 SLC2A10O95528 541 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 FABP3P05413 133 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 CALB2P22676 271 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 PPOXP50336 477 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF133P52736 654 aaPredicted RBP13.99□□□□□ -0.17
COL1A1-205ENST00000476387 GALK2Q01415 458 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 HGFACQ04756 655 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 FMODQ06828 376 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 RAB39AQ14964 217 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 ARHGAP24Q8N264 748 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 OR52J3Q8NH60 311 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 TSPAN32Q96QS1 320 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 RBP7Q96R05 134 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 KCNK17Q96T54 332 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 PIMREGQ9BSJ6 248 aa13.99□□□□□ -0.17
COL1A1-205ENST00000476387 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 LOC390937A0A1W2PQ73 354 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 MGRN1O60291 552 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 GADD45GO95257 159 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 SEMG1P04279 462 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 PATE4P0C8F1 98 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 IGHV4-31P0DP07 118 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 NPR2P20594 1047 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 THBS4P35443 961 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 GUCA1AP43080 201 aaPredicted RBP13.98□□□□□ -0.17
COL1A1-205ENST00000476387 RPS23P62266 143 aaKnown RBP13.98□□□□□ -0.17
COL1A1-205ENST00000476387 MTX3Q5HYI7 312 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 THEM4Q5T1C6 240 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 CYB5R2Q6BCY4 276 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 LRRC18Q8N456 261 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 LRRC75AQ8NAA5 344 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF519Q8TB69 540 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 NSMAFQ92636 917 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 DHRS1Q96LJ7 313 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF75AQ96N20 296 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 C1orf198Q9H425 327 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 GRHPRQ9UBQ7 328 aa13.98□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF346Q9UL40 294 aaKnown RBP13.98□□□□□ -0.17
COL1A1-205ENST00000476387 XKRYO14609 159 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 NDUFB2O95178 105 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 PTHP01270 115 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 SERPINA5P05154 406 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 CD14P08571 375 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 FAM157CP0CG43 387 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 NR4A1P22736 598 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 NR4A2P43354 598 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 GZMKP49863 264 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 ERVK-25P63136 954 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 MRPS34P82930 218 aaKnown RBP13.97□□□□□ -0.17
COL1A1-205ENST00000476387 HSF2Q03933 536 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 PLP2Q04941 152 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 FHL1Q13642 323 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 SEC23BQ15437 767 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 CYP2R1Q6VVX0 501 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 ZDHHC21Q8IVQ6 265 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 ARIH2OSQ8N7S6 290 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
COL1A1-205ENST00000476387 RSRC1Q96IZ7 334 aaKnown RBP13.97□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF570Q96NI8 536 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 VRK1Q99986 396 aaPredicted RBP13.97□□□□□ -0.17
COL1A1-205ENST00000476387 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 SIAEQ9HAT2 523 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 CCNB1IP1Q9NPC3 277 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 ACTR3BQ9P1U1 418 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 LPAR3Q9UBY5 353 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 SLC7A8Q9UHI5 535 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 ADAM18Q9Y3Q7 739 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 CMAHPQ9Y471 501 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 FBN3Q75N90 2809 aa13.97□□□□□ -0.17
COL1A1-205ENST00000476387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.96□□□□□ -0.17
COL1A1-205ENST00000476387 IQCMA0A1B0GVH7 501 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 ERCC1P07992 297 aaPredicted RBP13.96□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF35P13682 527 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 CDAP32320 146 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 OMPP47874 163 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 LIMS1P48059 325 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 SGCAQ16586 387 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 SLC25A47Q6Q0C1 308 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF584Q8IVC4 421 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 SVOPLQ8N434 492 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 CLDN22Q8N7P3 220 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 ZNF540Q8NDQ6 660 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 SLC30A7Q8NEW0 376 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 FGFBP3Q8TAT2 258 aa13.96□□□□□ -0.17
COL1A1-205ENST00000476387 RAB1BQ9H0U4 201 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms