RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 C1orf196B1AJZ1 125 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 SLC33A1O00400 549 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 LATO43561 262 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CEACAM4O75871 244 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ADAP00813 363 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TSPAN19P0C672 248 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TSPAN8P19075 237 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 FPR1P21462 350 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CHATP28329 748 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GABRR2P28476 465 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GGT2P36268 569 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CLDN20P56880 219 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TAS2R50P59544 299 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GFI1BQ5VTD9 330 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF283Q8N7M2 679 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TSTD1Q8NFU3 115 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR4K2Q8NGD2 314 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GPR152Q8TDT2 470 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TECTBQ96PL2 329 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 RNF157Q96PX1 679 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PRR14Q9BWN1 585 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 IL22Q9GZX6 179 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 APMAPQ9HDC9 416 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TAS2R13Q9NYV9 303 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TNFSF18Q9UNG2 199 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 POLR1DQ9Y2S0 133 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 LOC102723996A0A087X1L8 192 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 IGSF23A1L1A6 192 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM229AB2RXF0 380 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 DFFBO76075 338 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TRUB2O95900 331 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PRKCGP05129 697 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CD52P31358 61 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR1D2P34982 312 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PTPN7P35236 360 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CASRP41180 1078 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 SRSF3P84103 164 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 AESQ08117 197 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 RSU1Q15404 277 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 LRIF1Q5T3J3 769 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 SLC22A10Q63ZE4 541 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 B3GNTL1Q67FW5 361 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 XYLT1Q86Y38 959 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR4F15Q8NGB8 312 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR9Q2Q8NGE9 314 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ATG4AQ8WYN0 398 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ART4Q93070 314 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OTULINQ96BN8 352 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GALNT14Q96FL9 552 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 MSLNLQ96KJ4 702 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PGLYRP2Q96PD5 576 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 MARVELD1Q9BSK0 173 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 NUAK2Q9H093 628 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 FZD8Q9H461 694 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PLEKHA1Q9HB21 404 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ACP6Q9NPH0 428 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 MRPS18AQ9NVS2 196 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 UPB1Q9UBR1 384 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PCDHB14Q9Y5E9 798 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CLIC1O00299 241 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF208O43345 1280 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 RBMXL2O75526 392 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ABOP16442 354 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GABRB1P18505 474 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 AZGP1P25311 298 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 KDELR2P33947 212 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR2B8PP59922 312 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ERVFC1-1P60608 527 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 MC2RQ01718 297 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF616Q08AN1 781 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM211Q6ICI0 200 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 PHYKPLQ8IUZ5 450 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ACBD7Q8N6N7 88 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR13C9Q8NGT0 318 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR51F2Q8NH61 342 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM239Q8WW34 195 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ASB15Q8WXK1 588 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 IRF7Q92985 503 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ZBTB8AQ96BR9 441 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 OR52E6Q96RD3 313 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 C11orf54Q9H0W9 315 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 SLC25A32Q9H2D1 315 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 APOBEC3GQ9HC16 384 aaKnown RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 SEMA4BQ9NPR2 832 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CBLN4Q9NTU7 201 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 CLDND1Q9NY35 253 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 ING4Q9UNL4 249 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 GON4LQ3T8J9 2241 aa4.39□□□□□ -1.71
NPHP3-206ENST00000474871 A0A0G2JND7 137 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 HSPB2A8KAH6 182 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 CLDN11O75508 207 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 BPGMP07738 259 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 C1GALT1C1LP0DN25 315 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 HKR1P10072 659 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 PNMTP11086 282 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ACHEP22303 614 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MYL9P24844 172 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 NTSP30990 170 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms