RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NMNAT2Q9BZQ4 307 aa14.74□□□□□ -0.05
SCAF11-206ENST00000474828 SYT4Q9H2B2 425 aa14.74□□□□□ -0.05
SCAF11-206ENST00000474828 NOX3Q9HBY0 568 aa14.74□□□□□ -0.05
SCAF11-206ENST00000474828 FBXL3Q9UKT7 428 aa14.74□□□□□ -0.05
SCAF11-206ENST00000474828 RNF115Q9Y4L5 304 aa14.74□□□□□ -0.05
SCAF11-206ENST00000474828 POLQO75417 2590 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 OR6C68A6NDL8 312 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 H7C1C5 153 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 HLA-HP01893 362 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 CD3EP07766 207 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 CRABP1P29762 137 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 GIPRP48546 466 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 PTDSS1P48651 473 aaKnown RBP14.73□□□□□ -0.05
SCAF11-206ENST00000474828 ZNF83P51522 516 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 LCN6P62502 163 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 PPP2R2BQ00005 443 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 GSG1Q2KHT4 349 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 SLC36A3Q495N2 470 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 AMIGO2Q86SJ2 522 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 SYT9Q86SS6 491 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 MDP1Q86V88 176 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 ZDHHC13Q8IUH4 622 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 IL17RDQ8NFM7 739 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 NANOS1Q8WY41 292 aaKnown RBP14.73□□□□□ -0.05
SCAF11-206ENST00000474828 PKP2Q99959 881 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 RBM4Q9BWF3 364 aaKnown RBP14.73□□□□□ -0.05
SCAF11-206ENST00000474828 NUAK2Q9H093 628 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 RACGAP1Q9H0H5 632 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 ZNF556Q9HAH1 456 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 SLC25A19Q9HC21 320 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 S100A14Q9HCY8 104 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 POLE4Q9NR33 117 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 TMEFF2Q9UIK5 374 aaPredicted RBP14.73□□□□□ -0.05
SCAF11-206ENST00000474828 FKBP7Q9Y680 259 aa14.73□□□□□ -0.05
SCAF11-206ENST00000474828 DCTN6O00399 190 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 KHDRBS3O75525 346 aaKnown RBP14.72□□□□□ -0.05
SCAF11-206ENST00000474828 FARS2O95363 451 aaKnown RBP14.72□□□□□ -0.05
SCAF11-206ENST00000474828 SOX14O95416 240 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 PLAUP00749 431 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 CST2P09228 141 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 CECR9P0C854 216 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 GRK5P34947 590 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 RAB1AP62820 205 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 ETFDHQ16134 617 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 CLEC12AQ5QGZ9 265 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 MYPOPQ86VE0 399 aaPredicted RBP14.72□□□□□ -0.05
SCAF11-206ENST00000474828 ZNF584Q8IVC4 421 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 GLB1L2Q8IW92 636 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 OR6V1Q8N148 313 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 ZNF611Q8N823 705 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 ATG16L2Q8NAA4 619 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 OR4K13Q8NH42 304 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 NINJ1Q92982 152 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 NMNAT3Q96T66 252 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 CMC2Q9NRP2 79 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 TBC1D23Q9NUY8 699 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 B9D1Q9UPM9 204 aa14.72□□□□□ -0.05
SCAF11-206ENST00000474828 ABCD4O14678 606 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 SERPINA5P05154 406 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 SCG5P05408 212 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 GAAP10253 952 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 LAP3P28838 519 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 CDAP32320 146 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 SLC25A1P53007 311 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 LSM6P62312 80 aaKnown RBP14.71□□□□□ -0.05
SCAF11-206ENST00000474828 ESRRGP62508 458 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 TUBA1BP68363 451 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 TUBA4AP68366 448 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 NAAAQ02083 359 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.71□□□□□ -0.05
SCAF11-206ENST00000474828 ENDOGQ14249 297 aaKnown RBP14.71□□□□□ -0.05
SCAF11-206ENST00000474828 PGGHGQ32M88 737 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 SLC36A2Q495M3 483 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 ZNF672Q499Z4 452 aaPredicted RBP14.71□□□□□ -0.05
SCAF11-206ENST00000474828 SLC27A4Q6P1M0 643 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 LEG1Q6P5S2 330 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 PAMR1Q6UXH9 720 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 TUBA1AQ71U36 451 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 NSMAFQ92636 917 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 FBXO17Q96EF6 278 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 SH3GL3Q99963 347 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 GRIP2Q9C0E4 1043 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 PAPOLBQ9NRJ5 636 aaKnown RBP14.71□□□□□ -0.05
SCAF11-206ENST00000474828 KLHL21Q9UJP4 597 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 OAZ3Q9UMX2 235 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 AKAP9Q99996 3911 aa14.71□□□□□ -0.05
SCAF11-206ENST00000474828 OTOGQ6ZRI0 2925 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 SPG11Q96JI7 2443 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 E9PQ18 207 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 M0R1B8 84 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 HS3ST1O14792 307 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 SLC16A7O60669 478 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 TMCC2O75069 709 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 RENP00797 406 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 DANCRP0C864 163 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 ZNF35P13682 527 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 MSR1P21757 451 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 NOS3P29474 1203 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 HIST1H3AP68431 136 aa14.7□□□□□ -0.06
SCAF11-206ENST00000474828 EFNB1P98172 346 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms