RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 UCP2P55851 309 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 CD47Q08722 323 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 LAPTM4AQ15012 233 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 TRIP10Q15642 601 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 PCGF3Q3KNV8 242 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 FAM205BPQ63HN1 556 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 UNQ6126/PRO20091Q6UXV3 157 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 IL17RELQ6ZVW7 336 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 PAQR4Q8N4S7 273 aaPredicted RBP17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 RP9Q8TA86 221 aaKnown RBP17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 RCN3Q96D15 328 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 ALG12Q9BV10 488 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF416Q9BWM5 594 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 TAAR3PQ9P1P4 343 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 A4GNTQ9UNA3 340 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 FBN3Q75N90 2809 aa17.45■□□□□ 0.38
PDLIM4-206ENST00000474421 IGLV3-9A0A075B6K5 115 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 MT-ND5P03915 603 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 IFNW1P05000 195 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 IFI30P13284 250 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 CCL2P13500 99 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 GUCA1AP43080 201 aaPredicted RBP17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 ANKDD1AQ495B1 522 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 THEM4Q5T1C6 240 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 TMEM154Q6P9G4 183 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 OFCC1Q8IZS5 231 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 HDAC2Q92769 488 aaKnown RBP17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 NMD3Q96D46 503 aaKnown RBP17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 RBP7Q96R05 134 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 FNDC11Q9BVV2 318 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 HINT3Q9NQE9 182 aaKnown RBP17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 ARMCX1Q9P291 453 aa17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 TMEFF2Q9UIK5 374 aaPredicted RBP17.44■□□□□ 0.38
PDLIM4-206ENST00000474421 C17orf100A8MU93 164 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 B4DSR2 109 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 SLC2A10O95528 541 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 IGHMP01871 453 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 SAGP10523 405 aaPredicted RBP17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 COL8A2P25067 703 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 DVL1P1P54792 670 aaPredicted RBP17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 RPL27P61353 136 aaKnown RBP17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 GUCY1A3Q02108 690 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 TOP3AQ13472 1001 aaPredicted RBP17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 TRAM2Q15035 370 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 HSP90B2PQ58FF3 399 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 PABPC1L2AQ5JQF8 200 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 GEMIN6Q8WXD5 167 aaKnown RBP17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 HOPXQ9BPY8 73 aaPredicted RBP17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 OR51B6Q9H340 312 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 CMTM6Q9NX76 183 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 UGT2A1Q9Y4X1 527 aa17.43■□□□□ 0.38
PDLIM4-206ENST00000474421 A6NIZ1 184 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 GSTA4O15217 222 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 PIP5K1CO60331 668 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 CCDC22O60826 627 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 CLPTM1O96005 669 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 TFP02787 698 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 DRD4P21917 467 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 STOMP27105 288 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 CDAP32320 146 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 RAP1BP61224 184 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 RAP1AP62834 184 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 TEKQ02763 1124 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 CCNIQ14094 377 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 SGCAQ16586 387 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 FAM27BQ5VT28 67 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 SLC25A47Q6Q0C1 308 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 C1orf174Q8IYL3 243 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 RNF113BQ8IZP6 322 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 NSMAFQ92636 917 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 NABP1Q96AH0 204 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF275Q9NSD4 429 aaPredicted RBP17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 NKIRAS2Q9NYR9 191 aa17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 EIF3KQ9UBQ5 218 aaKnown RBP17.42■□□□□ 0.38
PDLIM4-206ENST00000474421 PPIHO43447 177 aaKnown RBP17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 NCR1O76036 304 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF32P17041 273 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 SRP14P37108 136 aaKnown RBP17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 SLC9A3P48764 834 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 GDI2P50395 445 aaKnown RBP17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 CTXN1P60606 82 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 PCBD1P61457 104 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 LIPEQ05469 1076 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 PRKCDQ05655 676 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 FMODQ06828 376 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 ALKBH6Q3KRA9 238 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 LIPNQ5VXI9 398 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 VTCN1Q7Z7D3 282 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 OAFQ86UD1 273 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 GLCCI1Q86VQ1 547 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 NRMQ8IXM6 262 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 SLC15A3Q8IY34 581 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 ALDH16A1Q8IZ83 802 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 ICA1LQ8NDH6 482 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 CPEB3Q8NE35 698 aaKnown RBP17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 OR1J1Q8NGS3 322 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 YIPF5Q969M3 257 aa17.41■□□□□ 0.38
PDLIM4-206ENST00000474421 RACGAP1Q9H0H5 632 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms