RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SOCS2O14508 198 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 DNAJC8O75937 253 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-210ENST00000473829 KRT36O76013 467 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 PPP1R3DO95685 299 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 MMP7P09237 267 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-210ENST00000473829 NR2C1P13056 603 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 ZNF35P13682 527 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 SDHAP31040 664 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 ADIPOQQ15848 244 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 ETFDHQ16134 617 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 DPY19L2P2Q6ZN68 376 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 FOXL2NBQ6ZUU3 175 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 PTCHD4Q6ZW05 846 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 NUP37Q8NFH4 326 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 OR4F15Q8NGB8 312 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 CANT1Q8WVQ1 401 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 RBP7Q96R05 134 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 NDEL1Q9GZM8 345 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 OR52D1Q9H346 318 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 DENND2DQ9H6A0 471 aaPredicted RBP16.38■□□□□ 0.21
PTCD3-210ENST00000473829 SIAEQ9HAT2 523 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 U3KQV3 271 aa16.38■□□□□ 0.21
PTCD3-210ENST00000473829 PRSS37A4D1T9 235 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 AQP12BA6NM10 295 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 XKRYO14609 159 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 ENTPD5O75356 428 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 SCG5P05408 212 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 RAP2AP10114 183 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 CTLA4P16410 223 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 THBS4P35443 961 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 TSPAN31Q12999 210 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 SNTB2Q13425 540 aaKnown RBP16.37■□□□□ 0.21
PTCD3-210ENST00000473829 SGCAQ16586 387 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 SWI5Q1ZZU3 235 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 RFX4Q33E94 735 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 GPR139Q6DWJ6 353 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 OR2T5Q6IEZ7 315 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 KRT80Q6KB66 452 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 ZNF620Q6ZNG0 422 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 AQP12AQ8IXF9 295 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 PAQR4Q8N4S7 273 aaPredicted RBP16.37■□□□□ 0.21
PTCD3-210ENST00000473829 OR2T29Q8NH02 315 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 FNDC8Q8TC99 324 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 GNPDA2Q8TDQ7 276 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 FBXO17Q96EF6 278 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 TRMT61AQ96FX7 289 aaKnown RBP16.37■□□□□ 0.21
PTCD3-210ENST00000473829 TRIM15Q9C019 465 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 RNF121Q9H920 327 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 POMPQ9Y244 141 aa16.37■□□□□ 0.21
PTCD3-210ENST00000473829 A0A1W2PPL8 197 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 TRIM64A6NGJ6 449 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 TRIM64BA6NI03 449 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 GSC2O15499 205 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 MGRN1O60291 552 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 STAMBPO95630 424 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 TXNDC12O95881 172 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 SERPINA5P05154 406 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 OR4A8P0C604 315 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 NPR2P20594 1047 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 IFNGR2P38484 337 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 CDKN2AP42771 156 aaKnown RBP16.36■□□□□ 0.21
PTCD3-210ENST00000473829 ERFP50548 548 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 DBPQ10586 325 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-210ENST00000473829 FLOT2Q14254 428 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 MSMPQ1L6U9 139 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 SLC36A2Q495M3 483 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 TMEM53Q6P2H8 277 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 CIARTQ8N365 385 aaPredicted RBP16.36■□□□□ 0.21
PTCD3-210ENST00000473829 IL17RDQ8NFM7 739 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 SAMD8Q96LT4 415 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 FOXN4Q96NZ1 517 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 CHID1Q9BWS9 393 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 SYT4Q9H2B2 425 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 EGLN3Q9H6Z9 239 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 ZNF442Q9H7R0 627 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 SLC7A8Q9UHI5 535 aa16.36■□□□□ 0.21
PTCD3-210ENST00000473829 SAMHD1Q9Y3Z3 626 aaKnown RBP16.36■□□□□ 0.21
PTCD3-210ENST00000473829 DHRS12A0PJE2 317 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 GPRIN2O60269 458 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 CCNB2O95067 398 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 GASTP01350 101 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 CCL2P13500 99 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 ZNF32P17041 273 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 NR4A1P22736 598 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 LAP3P28838 519 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 SLC6A6P31641 620 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 SERPINF1P36955 418 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 RPS6KA3P51812 740 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 DAG1Q14118 895 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 ENDOGQ14249 297 aaKnown RBP16.35■□□□□ 0.21
PTCD3-210ENST00000473829 FAM27BQ5VT28 67 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 UGT2A3Q6UWM9 527 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 DPPA2Q7Z7J5 298 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 SLC30A7Q8NEW0 376 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 POP5Q969H6 163 aaKnown RBP16.35■□□□□ 0.21
PTCD3-210ENST00000473829 ERMAPQ96PL5 475 aaPredicted RBP16.35■□□□□ 0.21
PTCD3-210ENST00000473829 REEP1Q9H902 201 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 VSX1Q9NZR4 365 aaPredicted RBP16.35■□□□□ 0.21
PTCD3-210ENST00000473829 FBXL3Q9UKT7 428 aa16.35■□□□□ 0.21
PTCD3-210ENST00000473829 TCRBV3S1A0A5B6 114 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms