RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	ANKRD22	Q5VYY1	191 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF530	Q6P9A1	599 aa	Predicted RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	TEX43	Q6ZNM6	134 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	OR4S2	Q8NH73	311 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SLC7A13	Q8TCU3	470 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	GIMAP1	Q8WWP7	306 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SEH1L	Q96EE3	360 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	PARP12	Q9H0J9	701 aa	Known RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	NEUROG2	Q9H2A3	272 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	RPF2	Q9H7B2	306 aa	Known RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	SAMSN1	Q9NSI8	373 aa	Known RBP	3.04	□□□□□ -1.92
BBX-223	ENST00000473542	HRASLS2	Q9NWW9	162 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	GCNT4	Q9P109	453 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	DEC1	Q9P2X7	70 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	ATRX	P46100	2492 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	CDC42BPB	Q9Y5S2	1711 aa		3.04	□□□□□ -1.92
BBX-223	ENST00000473542	ASTN1	O14525	1302 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	NFASC	O94856	1347 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	IGLV11-55	A0A075B6I3	123 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	LSM1	O15116	133 aa	Known RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	KLHL41	O60662	606 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	UTS2	O95399	124 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	RAB3D	O95716	219 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	AIFM1	O95831	613 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	SLC25A27	O95847	323 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	RET	P07949	1114 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	FGF4	P08620	206 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	MYL2	P10916	166 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	CXCL5	P42830	114 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	RPS10	P46783	165 aa	Known RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	NUTF2	P61970	127 aa	Known RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ACTA2	P62736	377 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ACTG2	P63267	376 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ACTC1	P68032	377 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ACTA1	P68133	377 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	LIPE	Q05469	1076 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	REG3A	Q06141	175 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	MRPL23	Q16540	153 aa	Known RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ALKBH6	Q3KRA9	238 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	XKR4	Q5GH76	650 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	CCNJ	Q5T5M9	372 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	TTC23L	Q6PF05	361 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	TMEM220	Q6QAJ8	160 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	STRADA	Q7RTN6	431 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	HDDC2	Q7Z4H3	204 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	GABRG1	Q8N1C3	465 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF433	Q8N7K0	673 aa	Predicted RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ARIH2OS	Q8N7S6	290 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	CCDC148	Q8NFR7	591 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	OR10G4	Q8NGN3	311 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF502	Q8TBZ5	544 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	SRSF12	Q8WXF0	261 aa	Known RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	NRGN	Q92686	78 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	DNAJC19	Q96DA6	116 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	DUS3L	Q96G46	650 aa	Known RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	GSDMA	Q96QA5	445 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	PANX1	Q96RD7	426 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	NTN4	Q9HB63	628 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	SLCO1B3	Q9NPD5	702 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	MTCH1	Q9NZJ7	389 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF629	Q9UEG4	869 aa	Predicted RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	CD84	Q9UIB8	345 aa		3.03	□□□□□ -1.92
BBX-223	ENST00000473542	PRG3	Q9Y2Y8	225 aa	Predicted RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.03	□□□□□ -1.92
BBX-223	ENST00000473542	ZNF816-ZNF321P	A0A0X1KG74	233 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SERTM2	A0A1B0GWG4	89 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SMCO2	A6NFE2	343 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	LYRM9	A8MSI8	78 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	HIDE1	A8MVS5	230 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542		F6UB75	175 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542		H0YIV9	168 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	HUS1	O60921	280 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SRP72	O76094	671 aa	Known RBP	3.02	□□□□□ -1.93
BBX-223	ENST00000473542	FGFR1OP	O95684	399 aa	Known RBP	3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SERPINA5	P05154	406 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	ANXA8	P13928	327 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	CCNB1	P14635	433 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	STOM	P27105	288 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	HOXA9	P31269	272 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	CDKN1B	P46527	198 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	ATP5O	P48047	213 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	MNAT1	P51948	309 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	NCBP2	P52298	156 aa	Known RBP eCLIP	3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SLC7A9	P82251	487 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	PAX5	Q02548	391 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SLC25A11	Q02978	314 aa	Known RBP	3.02	□□□□□ -1.93
BBX-223	ENST00000473542	TCP10	Q12799	353 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	SELENBP1	Q13228	472 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	PON3	Q15166	354 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	PPM1L	Q5SGD2	360 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	ANXA8L1	Q5VT79	327 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	ZNF493	Q6ZR52	646 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	LINC00173	Q6ZV60	143 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	EIF3M	Q7L2H7	374 aa	Known RBP	3.02	□□□□□ -1.93
BBX-223	ENST00000473542	MMAA	Q8IVH4	418 aa	Known RBP	3.02	□□□□□ -1.93
BBX-223	ENST00000473542	STPG2	Q8N412	459 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	COMMD1	Q8N668	190 aa		3.02	□□□□□ -1.93
BBX-223	ENST00000473542	PQLC3	Q8N755	202 aa		3.02	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms