RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 CDC42EP2O14613 210 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ZNF682O95780 498 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ERCC1P07992 297 aaPredicted RBP14.26□□□□□ -0.13
USP40-212ENST00000473191 THRBP10828 461 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 MDH1P40925 334 aaKnown RBP14.26□□□□□ -0.13
USP40-212ENST00000473191 WNT5AP41221 380 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 GSK3BP49841 420 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ZNF84P51523 738 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 CHN2P52757 468 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 CTXN1P60606 82 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 LCN6P62502 163 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ERVK-25P63136 954 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 GLO1Q04760 184 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 CR1LQ2VPA4 569 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 SLC36A2Q495M3 483 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 OTPQ5XKR4 325 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 TMEM53Q6P2H8 277 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ZNF101Q8IZC7 436 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ZNF540Q8NDQ6 660 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 MS4A5Q9H3V2 200 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 CDH20Q9HBT6 801 aa14.26□□□□□ -0.13
USP40-212ENST00000473191 ZNF275Q9NSD4 429 aaPredicted RBP14.26□□□□□ -0.13
USP40-212ENST00000473191 FBXO9Q9UK97 447 aaPredicted RBP14.26□□□□□ -0.13
USP40-212ENST00000473191 IGLV3-9A0A075B6K5 115 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 LOC100509620A0A075B734 347 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 A0A087WUU8 490 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 SERPINA1P01009 418 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 LCKP06239 509 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 ZNF250P15622 560 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 SRD5A1P18405 259 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 CCNOP22674 350 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 GPR4P46093 362 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 UCP2P55851 309 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 MRPS34P82930 218 aaKnown RBP14.25□□□□□ -0.13
USP40-212ENST00000473191 PRKCDQ05655 676 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 SGCAQ16586 387 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 NRN1LQ496H8 165 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 SPATA46Q5T0L3 261 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 CBLL1Q75N03 491 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 OFCC1Q8IZS5 231 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 CLDND2Q8NHS1 167 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 ZNF519Q8TB69 540 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 HSH2DQ96JZ2 352 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 MRGBPQ9NV56 204 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 LPAR3Q9UBY5 353 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 FBXL3Q9UKT7 428 aa14.25□□□□□ -0.13
USP40-212ENST00000473191 CENPBD1B2RD01 187 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 FAM157AC9JC47 383 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 IMPA2O14732 288 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 SLC22A2O15244 555 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 CDC14BO60729 498 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 RP2O75695 350 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 SNAP29O95721 258 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 IGHMP01871 453 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 IFNW1P05000 195 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 SAGP10523 405 aaPredicted RBP14.24□□□□□ -0.13
USP40-212ENST00000473191 LAP3P28838 519 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 MPV17P39210 176 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 CDH15P55291 814 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 RPL27P61353 136 aaKnown RBP14.24□□□□□ -0.13
USP40-212ENST00000473191 RPS23P62266 143 aaKnown RBP14.24□□□□□ -0.13
USP40-212ENST00000473191 CCL8P80075 99 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 PSG4Q00888 419 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 NKPD1Q17RQ9 610 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 TBC1D28Q2M2D7 210 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 UGT2A3Q6UWM9 527 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 OR1J1Q8NGS3 322 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 SYNPRQ8TBG9 265 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 POM121L2Q96KW2 1035 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 FNDC11Q9BVV2 318 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 SIAEQ9HAT2 523 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 ADAM18Q9Y3Q7 739 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 CACNG2Q9Y698 323 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 ATRQ13535 2644 aa14.24□□□□□ -0.13
USP40-212ENST00000473191 IQCMA0A1B0GVH7 501 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 NPIPB13A6NJU9 1138 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 C17orf100A8MU93 164 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 EFCAB9A8MZ26 197 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 NPIPB4C9JG80 1138 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 STOMP27105 288 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 LSP1P33241 339 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 NUDT2P50583 147 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 KLF3P57682 345 aaPredicted RBP14.23□□□□□ -0.13
USP40-212ENST00000473191 HSF2Q03933 536 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 DBPQ10586 325 aaPredicted RBP14.23□□□□□ -0.13
USP40-212ENST00000473191 TRAM2Q15035 370 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 SPRNQ5BIV9 151 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 FAM86B1Q8N7N1 296 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 RDH5Q92781 318 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 C1orf159Q96HA4 380 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 REPIN1Q9BWE0 567 aaKnown RBP14.23□□□□□ -0.13
USP40-212ENST00000473191 RACGAP1Q9H0H5 632 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 WNT5BQ9H1J7 359 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 LPAR2Q9HBW0 351 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 CCNB1IP1Q9NPC3 277 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 TREM2Q9NZC2 230 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 COL6A5A8TX70 2615 aa14.23□□□□□ -0.13
USP40-212ENST00000473191 MXRA5Q9NR99 2828 aa14.22□□□□□ -0.13
USP40-212ENST00000473191 NGFP01138 241 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms