RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SYNPRQ8TBG9 265 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 C11orf40Q8WZ69 217 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
VTI1A-203ENST00000472892 YIPF5Q969M3 257 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 KCTD12Q96CX2 325 aaKnown RBP13.09□□□□□ -0.31
VTI1A-203ENST00000472892 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 PRRC1Q96M27 445 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 SLCO1C1Q9NYB5 712 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 TAAR3PQ9P1P4 343 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 TMEFF2Q9UIK5 374 aaPredicted RBP13.09□□□□□ -0.31
VTI1A-203ENST00000472892 GPR160Q9UJ42 338 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 AP3M1Q9Y2T2 418 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 CAPN7Q9Y6W3 813 aa13.09□□□□□ -0.31
VTI1A-203ENST00000472892 IGKV1D-43A0A0B4J1Z2 117 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 NCR1O76036 304 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 SLC2A10O95528 541 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 LCKP06239 509 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 FUT4P22083 530 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 CDAP32320 146 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-203ENST00000472892 DVL1P1P54792 670 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-203ENST00000472892 KLF3P57682 345 aaPredicted RBP13.08□□□□□ -0.32
VTI1A-203ENST00000472892 NKPD1Q17RQ9 610 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 ALG10Q5BKT4 473 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 PABPC1L2AQ5JQF8 200 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 SLC25A47Q6Q0C1 308 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 SLC15A3Q8IY34 581 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 RP9Q8TA86 221 aaKnown RBP13.08□□□□□ -0.32
VTI1A-203ENST00000472892 LZICQ8WZA0 190 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 NABP1Q96AH0 204 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 RCN3Q96D15 328 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 ALG12Q9BV10 488 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 KCNN2Q9H2S1 579 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 CCDC134Q9H6E4 229 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 HINT3Q9NQE9 182 aaKnown RBP13.08□□□□□ -0.32
VTI1A-203ENST00000472892 ARMCX1Q9P291 453 aa13.08□□□□□ -0.32
VTI1A-203ENST00000472892 C17orf100A8MU93 164 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 B4DSR2 109 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 RP2O75695 350 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 IGHMP01871 453 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 NR2C1P13056 603 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 IFI30P13284 250 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 IFNA8P32881 189 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 APLNRP35414 380 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 MAGEB1P43366 347 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 GUCY1A3Q02108 690 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 FMODQ06828 376 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 CCNIQ14094 377 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 PCGF3Q3KNV8 242 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 THEM4Q5T1C6 240 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 CLDND2Q8NHS1 167 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 TSPAN32Q96QS1 320 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 RBP7Q96R05 134 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 ZNF416Q9BWM5 594 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 OR51B6Q9H340 312 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 ZNF275Q9NSD4 429 aaPredicted RBP13.07□□□□□ -0.32
VTI1A-203ENST00000472892 MAN2C1Q9NTJ4 1040 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 ZNF446Q9NWS9 450 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 NKIRAS2Q9NYR9 191 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
VTI1A-203ENST00000472892 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
VTI1A-203ENST00000472892 GMNCA6NCL1 334 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 FFAR1O14842 300 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 WNT9BO14905 357 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 IGHV3-13P01766 116 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 ZNF32P17041 273 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 MAKP20794 623 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 STOMP27105 288 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 YAP1P46937 504 aaKnown RBP13.06□□□□□ -0.32
VTI1A-203ENST00000472892 RPL27P61353 136 aaKnown RBP13.06□□□□□ -0.32
VTI1A-203ENST00000472892 HSF2Q03933 536 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 PRKCDQ05655 676 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 CD47Q08722 323 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 FHL1Q13642 323 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 SGCAQ16586 387 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 MOGQ16653 247 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 ALKBH6Q3KRA9 238 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 ANKDD1AQ495B1 522 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 TMEM154Q6P9G4 183 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 ARPINQ7Z6K5 226 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 VTCN1Q7Z7D3 282 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 RNF113BQ8IZP6 322 aaKnown RBP13.06□□□□□ -0.32
VTI1A-203ENST00000472892 OFCC1Q8IZS5 231 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 POU5F2Q8N7G0 328 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 FNDC8Q8TC99 324 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 NSMAFQ92636 917 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 POM121L2Q96KW2 1035 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 FNDC11Q9BVV2 318 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 CCNB1IP1Q9NPC3 277 aa13.06□□□□□ -0.32
VTI1A-203ENST00000472892 LOC100509620A0A075B734 347 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 J3KTA2 159 aa13.05□□□□□ -0.32
VTI1A-203ENST00000472892 PPIHO43447 177 aaKnown RBP13.05□□□□□ -0.32
VTI1A-203ENST00000472892 IFNW1P05000 195 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms