RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SLC8B1Q6J4K2 584 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ANKRD26P1Q6NSI1 321 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 DUX4L9Q6RFH8 374 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ZFP2Q6ZN57 461 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 MMAAQ8IVH4 418 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 GTPBP8Q8N3Z3 284 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 NOXO1Q8NFA2 376 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 STARD8Q92502 1023 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 SLC38A4Q969I6 547 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 CCDC126Q96EE4 140 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 PKNOX2Q96KN3 472 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 PARP12Q9H0J9 701 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 OR51M1Q9H341 326 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 RPP21Q9H633 154 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 ZNF629Q9UEG4 869 aaPredicted RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 PRO0461Q9UI25 63 aa2.34□□□□□ -2.03
PTCD3-209ENST00000472044 LSM7Q9UK45 103 aaKnown RBP2.34□□□□□ -2.03
PTCD3-209ENST00000472044 MAPK8IP3Q9UPT6 1336 aa2.34□□□□□ -2.04
PTCD3-209ENST00000472044 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 HIDE1A8MVS5 230 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 C9JVG2 144 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 RAB29O14966 203 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 PPP1R2P9O14990 202 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 CLOCKO15516 846 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 AIREO43918 545 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 SPAG7O75391 227 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 AIFM1O95831 613 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 CLIC3O95833 236 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 RETP07949 1114 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 GNAO1P09471 354 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 CYB561P49447 251 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 TMED10P49755 219 aaKnown RBP2.33□□□□□ -2.04
PTCD3-209ENST00000472044 PFN3P60673 137 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 TWF1Q12792 350 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 UBE2SQ16763 222 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 FAM92BQ6ZTR7 304 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 KIFAP3Q92845 792 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 CREB3L1Q96BA8 519 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 FAM3DQ96BQ1 224 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 DUS3LQ96G46 650 aaKnown RBP2.33□□□□□ -2.04
PTCD3-209ENST00000472044 TSNARE1Q96NA8 513 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 FOPNLQ96NB1 174 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 TGS1Q96RS0 853 aaKnown RBP2.33□□□□□ -2.04
PTCD3-209ENST00000472044 CHAC1Q9BUX1 264 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 NEUROG2Q9H2A3 272 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 VCXQ9H320 206 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 NOX3Q9HBY0 568 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 ISYNA1Q9NPH2 558 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 OR12D3Q9UGF7 316 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 PSG11Q9UQ72 335 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 PSG8Q9UQ74 426 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 GOLT1BQ9Y3E0 138 aa2.33□□□□□ -2.04
PTCD3-209ENST00000472044 IGHV3-74A0A0B4J1X5 117 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 IGHV5-51A0A0C4DH38 117 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 GLYATL1P3A0A0U1RQE8 302 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 ZNF816-ZNF321PA0A0X1KG74 233 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 SMCO3A2RU48 225 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 LRRIQ3A6PVS8 624 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 RSPH10B2B2RC85 870 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 F6UB75 175 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 INS-IGF2F8WCM5 200 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 MAGEB4O15481 346 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 RNF13O43567 381 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 ERLIN1O75477 346 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 SRP72O76094 671 aaKnown RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 AGTP01019 485 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 KRT14P02533 472 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 IGKV3-11P04433 115 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 RSPH10BP0C881 870 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 PABPC4LP0CB38 370 aaKnown RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CALM1P0DP23 149 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CALM2P0DP24 149 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CALM3P0DP25 149 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CCNB1P14635 433 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 IGFBP3P17936 291 aaPredicted RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 ACTA2P62736 377 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 ACTG2P63267 376 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 ACTC1P68032 377 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 ACTA1P68133 377 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 SLC25A11Q02978 314 aaKnown RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 MXD1Q05195 221 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 TCP10Q12799 353 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CCNJQ5T5M9 372 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 HES5Q5TA89 166 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CARD17Q5XLA6 110 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 LRRC66Q68CR7 880 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 OR52W1Q6IF63 320 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 FAM86B1Q8N7N1 296 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 OR10J6PQ8NGY7 276 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 SEH1LQ96EE3 360 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 BMFQ96LC9 184 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 SERPINB12Q96P63 405 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 OR2A5Q96R48 311 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 PLA2G2FQ9BZM2 168 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 GPATCH2LQ9NWQ4 482 aa2.32□□□□□ -2.04
PTCD3-209ENST00000472044 MRPS18BQ9Y676 258 aaKnown RBP2.32□□□□□ -2.04
PTCD3-209ENST00000472044 CAMTA1Q9Y6Y1 1673 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms