RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ENPP6Q6UWR7 440 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 PEX26Q7Z412 305 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 CEP112Q8N8E3 955 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 TMEM104Q8NE00 496 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 OR4K5Q8NGD3 323 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 OR8U1Q8NH10 309 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 CIRBP-AS1Q8TBR5 109 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 LKAAEAR1Q8TD35 194 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 MAGEE2Q8TD90 523 aaPredicted RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 C17orf50Q8WW18 174 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 TMEM54Q969K7 222 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 FAM3DQ96BQ1 224 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF681Q96N22 645 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 TTC25Q96NG3 672 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 MS4A4EQ96PG1 132 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 SLC38A2Q96QD8 506 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 MTMR9Q96QG7 549 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 RARRES2Q99969 163 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 KCTD14Q9BQ13 255 aaPredicted RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 FAIM2Q9BWQ8 316 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 SAV1Q9H4B6 383 aaPredicted RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 RPF2Q9H7B2 306 aaKnown RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 COQ10BQ9H8M1 238 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 PALMDQ9NP74 551 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 SAMSN1Q9NSI8 373 aaKnown RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 CGNQ9P2M7 1197 aaKnown RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 UVRAGQ9P2Y5 699 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 DHCR7Q9UBM7 475 aaKnown RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 CTSFQ9UBX1 484 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 DUX4Q9UBX2 424 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 AURKCQ9UQB9 309 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 IKBKGQ9Y6K9 419 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 LTBP4Q8N2S1 1624 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 ANKRD17O75179 2603 aaKnown RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 HECTD1Q9ULT8 2610 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 ATP8B3O60423 1300 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 RPAP1Q9BWH6 1393 aaPredicted RBP0.55□□□□□ -2.32
UBXN4-207ENST00000471246 FBN3Q75N90 2809 aa0.55□□□□□ -2.32
UBXN4-207ENST00000471246 SPTBN4Q9H254 2564 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ADGRL1O94910 1474 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 UBR4Q5T4S7 5183 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 JMJD1CQ15652 2540 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 IGHV3OR16-8A0A075B7F1 116 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 A0A1W2PNN7 141 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF716A6NP11 495 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ZNF878C9JN71 531 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 SPECC1L-ADORA2AF8WAN1 911 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 FCMRO60667 390 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TBX19O60806 448 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 OR7A10O76100 309 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 YIF1AO95070 293 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 RAB3DO95716 219 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 IGHV2-5P01817 119 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 HLA-DQA1P01909 254 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CD74P04233 296 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 GLAP06280 429 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CALM1P0DP23 149 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CALM2P0DP24 149 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CALM3P0DP25 149 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 DTYMKP23919 212 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ATP5C1P36542 298 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CEACAM6P40199 344 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 AQP2P41181 271 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 CDKN1BP46527 198 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 UGT2B15P54855 530 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TCP10Q12799 353 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 RGNQ15493 299 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 SNRNP35Q16560 246 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 PDK4Q16654 411 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ZSCAN26Q16670 478 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 PDZK1Q5T2W1 519 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 AP1ARQ63HQ0 302 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 SPECC1LQ69YQ0 1117 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 DNAJC24Q6P3W2 148 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ARL9Q6T311 187 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TEX43Q6ZNM6 134 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 HDDC2Q7Z4H3 204 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 OAFQ86UD1 273 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 LHFPL3Q86UP9 236 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 PRSS58Q8IYP2 241 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ARL10Q8N8L6 244 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 ST20-AS1Q8NBB2 130 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 C1orf64Q8NEQ6 169 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 OR5M1Q8NGP8 315 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 OR9A2Q8NGT5 310 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 OR13G1Q8NGZ3 307 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 OR2G2Q8NGZ5 317 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 LILRB4Q8NHJ6 448 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 FLYWCH2Q96CP2 140 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TVP23CQ96ET8 276 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 DNAJC1Q96KC8 554 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 SENP8Q96LD8 212 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 HSFY1Q96LI6 401 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 P2RX4Q99571 388 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 SH3GL3Q99963 347 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 THUMPD2Q9BTF0 503 aaKnown RBP0.54□□□□□ -2.32
UBXN4-207ENST00000471246 TMEM59Q9BXS4 323 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 POLE3Q9NRF9 147 aa0.54□□□□□ -2.32
UBXN4-207ENST00000471246 DDX19AQ9NUU7 478 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms