RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 KCNG2Q9UJ96 466 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 B9D1Q9UPM9 204 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 ADGRG4Q8IZF6 3080 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 DOPEY2Q9Y3R5 2298 aa11.06□□□□□ -0.64
SPTLC1-204ENST00000469778 OR6C68A6NDL8 312 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 ZAR1LA6NP61 321 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 EI24O14681 340 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 SURF4O15260 269 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 PTHP01270 115 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 THBDP07204 575 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 CST2P09228 141 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 MSR1P21757 451 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 FOXG1P55316 489 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 TRIP10Q15642 601 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 SLX4IPQ5VYV7 408 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 ACSM5Q6NUN0 579 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 TMEM108Q6UXF1 575 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 PTCHD4Q6ZW05 846 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 OR6V1Q8N148 313 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC37A3Q8NCC5 494 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 NSMAFQ92636 917 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 NMNAT2Q9BZQ4 307 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 C1orf198Q9H425 327 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 RNPEPL1Q9HAU8 725 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 B3GNT2Q9NY97 397 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 CRNNQ9UBG3 495 aaPredicted RBP11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 UGT2A1Q9Y4X1 527 aa11.05□□□□□ -0.64
SPTLC1-204ENST00000469778 FAM221AA4D161 298 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 A6NNC1 897 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 H0YJX3 145 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 PRODHO43272 600 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 TMCC2O75069 709 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC2A10O95528 541 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 IGFBP1P08833 259 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 B4GALT1P15291 398 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 CTLA4P16410 223 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 HSF2Q03933 536 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 TSC22D1Q15714 1073 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 SNAPC1Q16533 368 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 HIKESHIQ53FT3 197 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 C9orf135Q5VTT2 229 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 TMEM53Q6P2H8 277 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC16A14Q7RTX9 510 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 DEPDC4Q8N2C3 294 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 OR52N5Q8NH56 324 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 IPCEF1Q8WWN9 437 aaPredicted RBP11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 HRASLS5Q96KN8 279 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 GRIP2Q9C0E4 1043 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 VCX3BQ9H321 246 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 SEC61A2Q9H9S3 476 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 SRA1Q9HD15 236 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 RPRD1BQ9NQG5 326 aaKnown RBP11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 EDARQ9UNE0 448 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 TIMM10BQ9Y5J6 103 aa11.04□□□□□ -0.64
SPTLC1-204ENST00000469778 A0A096LPE4 126 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 IGLV1-36A0A0B4J1U3 117 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 A0A1W2PPZ6 126 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 PRR23D1E9PI22 279 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 MPZL2O60487 215 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 MITFO75030 526 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 PRR23D2P0DMB1 279 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 CDC42P60953 191 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 RAB1AP62820 205 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 EFNB1P98172 346 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 PLP2Q04941 152 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 FMODQ06828 376 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 CRMP1Q14194 572 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 SGCAQ16586 387 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC35D3Q5M8T2 416 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 OGFRL1Q5TC84 451 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 C12orf73Q69YU5 71 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 WFDC8Q8IUA0 241 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 ALDH16A1Q8IZ83 802 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 SDR9C7Q8NEX9 313 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 OR8J1Q8NGP2 316 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 PTP4A1Q93096 173 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 NABP1Q96AH0 204 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 SLC29A1Q99808 456 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 POLE4Q9NR33 117 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 SMPD3Q9NY59 655 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 TVP23BQ9NYZ1 205 aa11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 COA3Q9Y2R0 106 aaPredicted RBP11.03□□□□□ -0.64
SPTLC1-204ENST00000469778 A0A1W2PPL8 197 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 SNTNA6NMZ2 147 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 H7C1C5 153 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 SLC16A6O15403 523 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 CTAG2O75638 210 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 RAB36O95755 333 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 IGLV1-44P01699 117 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 SERPINA5P05154 406 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 CD79AP11912 226 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 ZNF823P16415 610 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 FMO3P31513 532 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 CAPZA2P47755 286 aa11.02□□□□□ -0.65
SPTLC1-204ENST00000469778 LCN6P62502 163 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms