RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ZNF12P17014 697 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 C21orf33P30042 268 aaPredicted RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 RPS5P46782 204 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 VBP1P61758 197 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 SNRPGP62308 76 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 LSM3P62310 102 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ST3GAL4Q11206 333 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 FAPQ12884 760 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 CBX3Q13185 183 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 STK11Q15831 433 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 FAM69AQ5T7M9 428 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 SLX4IPQ5VYV7 408 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 PGBD2Q6P3X8 592 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ZBTB46Q86UZ6 589 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 PRRC1Q96M27 445 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF385AQ96PM9 386 aaKnown RBP12.72□□□□□ -0.37
COL27A1-203ENST00000468565 CCL19Q99731 98 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 FUZQ9BT04 418 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 SELENONQ9NZV5 590 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 UPB1Q9UBR1 384 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 RNF115Q9Y4L5 304 aa12.72□□□□□ -0.37
COL27A1-203ENST00000468565 hCG_2014768A0A024R1R8 64 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 A0A087WUJ7 227 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 CLDN25C9JDP6 229 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 H3BN98 237 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 HS3ST1O14792 307 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 TPST2O60704 377 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 TMCC2O75069 709 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 RAD51DO75771 328 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 PLAUP00749 431 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 CD3EP07766 207 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 GTF2E2P29084 291 aaKnown RBP12.71□□□□□ -0.37
COL27A1-203ENST00000468565 COX10Q12887 443 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 IRF3Q14653 427 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 ALKBH2Q6NS38 261 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF367Q7RTV3 350 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 AAED1Q7RTV5 226 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 GPAT4Q86UL3 456 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 ZNF611Q8N823 705 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 C1orf162Q8NEQ5 155 aaPredicted RBP12.71□□□□□ -0.37
COL27A1-203ENST00000468565 OR6S1Q8NH40 331 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 DYNC2LI1Q8TCX1 351 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 LGALS12Q96DT0 336 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 KTI12Q96EK9 354 aaPredicted RBP12.71□□□□□ -0.37
COL27A1-203ENST00000468565 WFDC6Q9BQY6 131 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 SLC7A10Q9NS82 523 aa12.71□□□□□ -0.37
COL27A1-203ENST00000468565 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL27A1-203ENST00000468565 TRAV36DV7A0A075B6V5 113 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 CIB4A0PJX0 185 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 M0R129 80 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 AIREO43918 545 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ITGA5P08648 1049 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ADORA3P0DMS8 318 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 PIPP12273 146 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-203ENST00000468565 HOXC12P31275 282 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 OPRL1P41146 370 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 NCS1P62166 190 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ADAM8P78325 824 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 PIN1Q13526 163 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-203ENST00000468565 GABRA6Q16445 453 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 TSPO2Q5TGU0 170 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 C12orf73Q69YU5 71 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 PODNL1Q6PEZ8 512 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF613Q6PF04 617 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 Q6ZNX1 250 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 CREB3L2Q70SY1 520 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 POMGNT2Q8NAT1 580 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 IGFBPL1Q8WX77 278 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 PRR14Q9BWN1 585 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 CDCA4Q9BXL8 241 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 SLCO5A1Q9H2Y9 848 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-203ENST00000468565 OR6C65A6NJZ3 312 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 M0R082 166 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 SMPD2O60906 423 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 CD99P14209 185 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 IFNA8P32881 189 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 LIPAP38571 399 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 TUBA1BP68363 451 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ANKDD1AQ495B1 522 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 SHEQ5VZ18 495 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 CD300LDQ6UXZ3 194 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 TUBA1AQ71U36 451 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 SLC46A3Q7Z3Q1 461 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ABHD12BQ7Z5M8 362 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-203ENST00000468565 C17orf78Q8N4C9 275 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 ADPRHL1Q8NDY3 354 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 SLC7A13Q8TCU3 470 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 AKAP1Q92667 903 aaKnown RBP eCLIP12.7□□□□□ -0.38
COL27A1-203ENST00000468565 TAAR8Q969N4 342 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 B3GALT5Q9Y2C3 310 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 VPS13CQ709C8 3753 aa12.7□□□□□ -0.38
COL27A1-203ENST00000468565 PLCE1Q9P212 2302 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms