RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 KRT77Q7Z794 578 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 GALNT16Q8N428 558 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 PARP16Q8N5Y8 322 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 OR2G2Q8NGZ5 317 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 OR2V1Q8NHB1 315 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 GPR148Q8TDV2 347 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 HAS2Q92819 552 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 CPNE4Q96A23 557 aaPredicted RBP9.1□□□□□ -0.95
MSH5-213ENST00000468136 COX4I2Q96KJ9 171 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 UBL7Q96S82 380 aaPredicted RBP9.1□□□□□ -0.95
MSH5-213ENST00000468136 NPAS1Q99742 590 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 TPK1Q9H3S4 243 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 C1orf198Q9H425 327 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 RERGLQ9H628 205 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 SP140LQ9H930 580 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 MRPL22Q9NWU5 206 aaKnown RBP9.1□□□□□ -0.95
MSH5-213ENST00000468136 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
MSH5-213ENST00000468136 COL6A3P12111 3177 aa9.1□□□□□ -0.95
MSH5-213ENST00000468136 TRBV5-5A0A0J9YX44 114 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 OR5H15A6NDH6 313 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 SHISA8B8ZZ34 492 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 J3QRK9 145 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 NEURL1O76050 574 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 WISP1O95388 367 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 APOA1P02647 267 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 APOC1P02654 83 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 CD2P06729 351 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 SPARCP09486 303 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 OR8G3PP0DMU2 310 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 HLA-DOBP13765 273 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 POU3F2P20265 443 aaPredicted RBP9.09□□□□□ -0.95
MSH5-213ENST00000468136 GDF1P27539 372 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 CSNK1A1P48729 337 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 CD97P48960 835 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 DNASE1L1P49184 302 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 CAPZA1P52907 286 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 HCCSP53701 268 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 CARD18P57730 90 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 MXD1Q05195 221 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 MFAP5Q13361 173 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 EIF2B1Q14232 305 aaKnown RBP9.09□□□□□ -0.95
MSH5-213ENST00000468136 RTP5Q14D33 572 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 TOMM20Q15388 145 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 INPP5JQ15735 1006 aaPredicted RBP9.09□□□□□ -0.95
MSH5-213ENST00000468136 MEP1BQ16820 701 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 HACD4Q5VWC8 232 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 SLC25A47Q6Q0C1 308 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 LRRN1Q6UXK5 716 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 Q6ZNX1 250 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 GPAT4Q86UL3 456 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 ZNF227Q86WZ6 799 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 LRRC28Q86X40 367 aaPredicted RBP9.09□□□□□ -0.95
MSH5-213ENST00000468136 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.09□□□□□ -0.95
MSH5-213ENST00000468136 GHDCQ8N2G8 530 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 TMEM178AQ8NBL3 297 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 FAM83FQ8NEG4 500 aaPredicted RBP9.09□□□□□ -0.95
MSH5-213ENST00000468136 CCDC54Q8NEL0 328 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 OR2M7Q8NG81 312 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 OR9K2Q8NGE7 335 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 C15orf40Q8WUR7 153 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 DIRAS2Q96HU8 199 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 C4orf45Q96LM5 186 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 ATF6BQ99941 703 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 KCNS3Q9BQ31 491 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 LRFN3Q9BTN0 628 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 ELOVL3Q9HB03 270 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 B3GAT2Q9NPZ5 323 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 ASCL3Q9NQ33 180 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 MED29Q9NX70 200 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 IL17BQ9UHF5 180 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 HRH3Q9Y5N1 445 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 R4GMQ9 66 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 PCNX3Q9H6A9 2034 aa9.09□□□□□ -0.95
MSH5-213ENST00000468136 SPAARA0A1B0GVQ0 90 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 MEGF11A6BM72 1044 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 FABP12A6NFH5 140 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 OR4C45A6NMZ5 311 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 ZNF891A8MT65 544 aaPredicted RBP9.08□□□□□ -0.96
MSH5-213ENST00000468136 ACOT7O00154 380 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 CTDSP2O14595 271 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 TM4SF5O14894 197 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 NME2P1O60361 137 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 ZFPL1O95159 310 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 PTTG1O95997 202 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 ACTL6AO96019 429 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 ISG15P05161 165 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 SP1P08047 785 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 UBCP0CG48 685 aaKnown RBP9.08□□□□□ -0.96
MSH5-213ENST00000468136 SRMP19623 302 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 NPR2P20594 1047 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 NME2P22392 152 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 CFPP27918 469 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 SHC1P29353 583 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 MMP16P51512 607 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 ZNF84P51523 738 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 GFRA1P56159 465 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 CLDN6P56747 220 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 RPS11P62280 158 aaKnown RBP eCLIP9.08□□□□□ -0.96
MSH5-213ENST00000468136 OXA1LQ15070 435 aa9.08□□□□□ -0.96
MSH5-213ENST00000468136 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms