RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ACBD4Q8NC06 268 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 BCL2L2Q92843 193 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-205ENST00000466897 PTP4A1Q93096 173 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 APOL4Q9BPW4 351 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 WACQ9BTA9 647 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 NELFAQ9H3P2 528 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 NPDC1Q9NQX5 325 aaPredicted RBP13.33□□□□□ -0.28
NPHP4-205ENST00000466897 IMPAD1Q9NX62 359 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 MOKQ9UQ07 419 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 HSPE1-MOB4S4R3N1 261 aa13.33□□□□□ -0.28
NPHP4-205ENST00000466897 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 CIB4A0PJX0 185 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 OR5H1A6NKK0 313 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 HRGP04196 525 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 OR8G3PP0DMU2 310 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 SPI1P17947 270 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 IGFBP2P18065 325 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 SLC2A5P22732 501 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 IL32P24001 234 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 LAP3P28838 519 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 GUCA1AP43080 201 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-205ENST00000466897 SNRPGP62308 76 aaKnown RBP13.32□□□□□ -0.28
NPHP4-205ENST00000466897 KCNMB1Q16558 191 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 AADACL4Q5VUY2 407 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 ZNF691Q5VV52 312 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 PLBD1Q6P4A8 553 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 IZUMO2Q6UXV1 221 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 CXXC5Q7LFL8 322 aaKnown RBP13.32□□□□□ -0.28
NPHP4-205ENST00000466897 CPOQ8IVL8 374 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 SLC22A24Q8N4F4 322 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 TCEANCQ8N8B7 351 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 SETD9Q8NE22 299 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 NSMAFQ92636 917 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 TFAP2CQ92754 450 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 NABP1Q96AH0 204 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 TSSK2Q96PF2 358 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 SIAEQ9HAT2 523 aa13.32□□□□□ -0.28
NPHP4-205ENST00000466897 MOV10Q9HCE1 1003 aaKnown RBP13.32□□□□□ -0.28
NPHP4-205ENST00000466897 ADGRG4Q8IZF6 3080 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 FAM183AA6NL82 134 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 TLX2O43763 284 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-205ENST00000466897 RAD51DO75771 328 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
NPHP4-205ENST00000466897 GAAP10253 952 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 GABRB1P18505 474 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 LSM6P62312 80 aaKnown RBP13.31□□□□□ -0.28
NPHP4-205ENST00000466897 TEKQ02763 1124 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 HSF2Q03933 536 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 ETFDHQ16134 617 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 TBRG1Q3YBR2 411 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 LINC01590Q5TEZ4 76 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 FAM27BQ5VT28 67 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 C9orf135Q5VTT2 229 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 MEDAGQ5VYS4 303 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 ZNF813Q6ZN06 617 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 USP51Q70EK9 711 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 GID4Q8IVV7 300 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 SLC26A10Q8NG04 563 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 HCAR1Q9BXC0 346 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 ACTR6Q9GZN1 396 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 SRA1Q9HD15 236 aaKnown RBP13.31□□□□□ -0.28
NPHP4-205ENST00000466897 POLE4Q9NR33 117 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 SLC17A5Q9NRA2 495 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 KCNG2Q9UJ96 466 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 COA3Q9Y2R0 106 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-205ENST00000466897 AMDHD2Q9Y303 409 aa13.31□□□□□ -0.28
NPHP4-205ENST00000466897 GLCEO94923 617 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 B4GALT1P15291 398 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 MSR1P21757 451 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 HOXC12P31275 282 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 TMED1Q13445 227 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 OCLNQ16625 522 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 SYT9Q86SS6 491 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 ENTHD1Q8IYW4 607 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 OR9Q1Q8NGQ5 310 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 RHOXF1Q8NHV9 184 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
NPHP4-205ENST00000466897 HSD17B8Q92506 261 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 S100PBPQ96BU1 408 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 IL4I1Q96RQ9 567 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 SLC24A3Q9HC58 644 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 ZNF226Q9NYT6 803 aa13.3□□□□□ -0.28
NPHP4-205ENST00000466897 A0A1W2PPL8 197 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 SLC22A31A6NKX4 558 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 M0R129 80 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 GYPBP06028 91 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 CST2P09228 141 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 CLUP10909 449 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 GRNP28799 593 aaKnown RBP13.29□□□□□ -0.28
NPHP4-205ENST00000466897 FMO3P31513 532 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 CDAP32320 146 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 PYCR1P32322 319 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 GGTLC2Q14390 218 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 TSC22D1Q15714 1073 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 LCN1P1Q5VSP4 162 aa13.29□□□□□ -0.28
NPHP4-205ENST00000466897 KLHL24Q6TFL4 600 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms