RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 RNASEKQ6P5S7 137 aaKnown RBP2.5□□□□□ -2.01
LRCH3-211ENST00000466054 DUX4L9Q6RFH8 374 aaPredicted RBP2.5□□□□□ -2.01
LRCH3-211ENST00000466054 OAFQ86UD1 273 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 LIX1Q8N485 282 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 EID2Q8N6I1 236 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 HSD17B11Q8NBQ5 300 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 NOXO1Q8NFA2 376 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 B3GNT7Q8NFL0 401 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 OR1S2Q8NGQ3 325 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 KCNG3Q8TAE7 436 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 FAM3DQ96BQ1 224 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 CHAC1Q9BUX1 264 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 CWH43Q9H720 699 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 HPCAL4Q9UM19 191 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 IKBKGQ9Y6K9 419 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 SLIT3O75094 1523 aa2.5□□□□□ -2.01
LRCH3-211ENST00000466054 A0A1B0GVX0 72 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 F6UB75 175 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 PPP1R2P9O14990 202 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 ENTPD5O75356 428 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 SLC25A14O95258 325 aaPredicted RBP2.49□□□□□ -2.01
LRCH3-211ENST00000466054 AIFM1O95831 613 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 FABP3P05413 133 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 PSMC3P17980 439 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 PGAM1P18669 254 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 TNNT2P45379 298 aaPredicted RBP2.49□□□□□ -2.01
LRCH3-211ENST00000466054 CDKN1BP46527 198 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 CCNHP51946 323 aaPredicted RBP2.49□□□□□ -2.01
LRCH3-211ENST00000466054 ACTA2P62736 377 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 ACTC1P68032 377 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 GINS1Q14691 196 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 THEM4Q5T1C6 240 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 NANOGP8Q6NSW7 305 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 TAS2R42Q7RTR8 314 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 BIVMQ86UB2 503 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 PGAM4Q8N0Y7 254 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 SEH1LQ96EE3 360 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 ING4Q9UNL4 249 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 PSG8Q9UQ74 426 aa2.49□□□□□ -2.01
LRCH3-211ENST00000466054 CSDC2Q9Y534 153 aaKnown RBP2.49□□□□□ -2.01
LRCH3-211ENST00000466054 MAPK8IP3Q9UPT6 1336 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 MRPL3P09001 348 aaKnown RBP2.48□□□□□ -2.01
LRCH3-211ENST00000466054 GNAO1P09471 354 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 IGHV1-8P0DP01 117 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 PRPS2P11908 318 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 CCNB1P14635 433 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 CDKN2BP42772 138 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 NSG1P42857 185 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ARG2P78540 354 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ADARB1P78563 741 aaKnown RBP2.48□□□□□ -2.01
LRCH3-211ENST00000466054 TWF1Q12792 350 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 LY6G6FQ5SQ64 297 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 CCNJQ5T5M9 372 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ANKRD26P1Q6NSI1 321 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 CERS6Q6ZMG9 384 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ZNF836Q6ZNA1 936 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ASCL5Q7RTU5 278 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ABHD12BQ7Z5M8 362 aaPredicted RBP2.48□□□□□ -2.01
LRCH3-211ENST00000466054 FAM228AQ86W67 206 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ZNF695Q8IW36 515 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 OR56B2PQ8NGI1 322 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 OR5W2Q8NH69 310 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 SPIN2AQ99865 258 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 SPIN2BQ9BPZ2 258 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 ZNF430Q9H8G1 570 aaPredicted RBP2.48□□□□□ -2.01
LRCH3-211ENST00000466054 PISDQ9UG56 409 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 GOLT1BQ9Y3E0 138 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 YTHDF2Q9Y5A9 579 aaKnown RBP2.48□□□□□ -2.01
LRCH3-211ENST00000466054 MRPS18BQ9Y676 258 aaKnown RBP2.48□□□□□ -2.01
LRCH3-211ENST00000466054 USP47Q96K76 1375 aa2.48□□□□□ -2.01
LRCH3-211ENST00000466054 IGLV1-50A0A075B6I6 118 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 IGHV5-10-1A0A0J9YXX1 117 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 A0A1W2PP18 115 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 XKRY2A2RUG3 117 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 TMEM150BA6NC51 233 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 SPECC1L-ADORA2AF8WAN1 911 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 GABARAPO95166 117 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 HLA-DPB1P04440 258 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 TROVE2P10155 538 aaKnown RBP eCLIP2.47□□□□□ -2.01
LRCH3-211ENST00000466054 RAB3BP20337 219 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 HNRNPH3P31942 346 aaKnown RBP2.47□□□□□ -2.01
LRCH3-211ENST00000466054 PMELP40967 661 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 AQP2P41181 271 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 CSNK1A1P48729 337 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 RAP1AP62834 184 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 ACTG2P63267 376 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 RABL6Q3YEC7 729 aaPredicted RBP2.47□□□□□ -2.01
LRCH3-211ENST00000466054 SPECC1LQ69YQ0 1117 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 Q6ZR03 302 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 NIPA1Q7RTP0 329 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 UBALD2Q8IYN6 164 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 FBXL13Q8NEE6 735 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 AKR7LQ8NHP1 331 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 ABHD3Q8WU67 409 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 FRZBQ92765 325 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 CCDC126Q96EE4 140 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 PKNOX2Q96KN3 472 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 SERPINB12Q96P63 405 aa2.47□□□□□ -2.01
LRCH3-211ENST00000466054 SLC25A2Q9BXI2 301 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms