RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 WDR38Q5JTN6 314 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 AVPI1Q5T686 147 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 PRAMEF17Q5VTA0 474 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 TMEM88Q6PEY1 159 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 IL34Q6ZMJ4 242 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 SFTPA1Q8IWL2 248 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 CA13Q8N1Q1 262 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 BPIFB2Q8N4F0 458 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 INO80EQ8NBZ0 244 aaPredicted RBP6.6□□□□□ -1.35
USP48-206ENST00000464577 RCBTB1Q8NDN9 531 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 SLC30A7Q8NEW0 376 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 OR51A4Q8NGJ6 313 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 OR6N2Q8NGY6 317 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 OR8K3Q8NH51 312 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 THAP6Q8TBB0 222 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 GLYATL2Q8WU03 294 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 MITD1Q8WV92 249 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 ANKRD9Q96BM1 317 aaPredicted RBP6.6□□□□□ -1.35
USP48-206ENST00000464577 PIK3IP1Q96FE7 263 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 CNTNAP3BQ96NU0 1288 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 INTS14Q96SY0 518 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 PRRT1Q99946 306 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 G6PC3Q9BUM1 346 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 SEC11CQ9BY50 192 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 SRMSQ9H3Y6 488 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 WBP1LQ9NX94 342 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 CEP350Q5VT06 3117 aa6.6□□□□□ -1.35
USP48-206ENST00000464577 TRBV6-7A0A0A0MS04 114 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TEX13DA0A0J9YY54 714 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 SERINC4A6NH21 518 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ELOA3DA6NLF2 546 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 C4orf47A7E2U8 309 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 EIF1AYO14602 144 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 LDLRAD4O15165 306 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 NUDT21O43809 227 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 ALOX12BO75342 701 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 AKR7A3O95154 331 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ADH1BP00325 375 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RENP00797 406 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 GNRH1P01148 92 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TPT1P13693 172 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 FOLR2P14207 255 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 S1PR1P21453 382 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 PAX6P26367 422 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 IGFALSP35858 605 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 EIF1AXP47813 144 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 CAPZA1P52907 286 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RAB38P57729 211 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CTXN1P60606 82 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CXADRP78310 365 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 BLOC1S1P78537 153 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ELOA3BQ3SY89 546 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ALG10Q5BKT4 473 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 EEF1A1P5Q5VTE0 462 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 FIGLAQ6QHK4 219 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 NUP54Q7Z3B4 507 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 GRASPQ7Z6J2 395 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 ADGRE4PQ86SQ3 457 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CBLN2Q8IUK8 224 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 GTPBP8Q8N3Z3 284 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 MRPL43Q8N983 215 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 ELOA3Q8NG57 546 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OR5AP2Q8NGF4 316 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 RNF141Q8WVD5 230 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ASB17Q8WXJ9 295 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 PTX4Q96A99 478 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 VSTM2LQ96N03 204 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TOX2Q96NM4 488 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TSSK2Q96PF2 358 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OR2M4Q96R27 311 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OR8B4Q96RC9 309 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ZNF587Q96SQ5 575 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 CDC6Q99741 560 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ZFYVE21Q9BQ24 234 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 KCNK15Q9H427 330 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ZNF768Q9H5H4 540 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 FANCFQ9NPI8 374 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 MMP26Q9NRE1 261 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 MYEF2Q9P2K5 600 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 MSRAQ9UJ68 235 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 FBXO4Q9UKT5 387 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 TBX21Q9UL17 535 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ZNF346Q9UL40 294 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 MRPS2Q9Y399 296 aaKnown RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 TVP23AA6NH52 213 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 GRXCR1A8MXD5 290 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CCSO14618 274 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 OR10H2O60403 315 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 FADS1O60427 444 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ACTL6AO96019 429 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CSTAP01040 98 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 POU2F2P09086 479 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ASAH2BP0C7U1 165 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 ABOP16442 354 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 IGFBP3P17936 291 aaPredicted RBP6.59□□□□□ -1.35
USP48-206ENST00000464577 C5AR1P21730 350 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 HTR2CP28335 458 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 CCKBRP32239 447 aa6.59□□□□□ -1.35
USP48-206ENST00000464577 PBX2P40425 430 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms