RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 RGS21Q2M5E4 152 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 TRMT5Q32P41 509 aaKnown RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 NDUFAF6Q330K2 333 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 PAN3Q58A45 887 aaKnown RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 CARD16Q5EG05 197 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 KHDRBS2Q5VWX1 349 aaKnown RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 CERS6Q6ZMG9 384 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 MOB2Q70IA6 237 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 OR2W3Q7Z3T1 314 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 UNC93AQ86WB7 457 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 KIF2BQ8N4N8 673 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 OR5B3Q8NH48 314 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 OR6X1Q8NH79 312 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 UFD1Q92890 307 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 RPEQ96AT9 228 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 B3GALT6Q96L58 329 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 PPP1R36Q96LQ0 422 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 LINC00167Q96N53 147 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 APOL2Q9BQE5 337 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 SLC35A5Q9BS91 424 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 CCDC28BQ9BUN5 200 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 ZYG11BQ9C0D3 744 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 DEFB129Q9H1M3 183 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 SYT4Q9H2B2 425 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 WDR54Q9H977 334 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 WRAP73Q9P2S5 460 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-208ENST00000464001 GALPQ9UBC7 116 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 PLEKHH1Q9ULM0 1364 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 ERVW-1Q9UQF0 538 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 HYOU1Q9Y4L1 999 aa3.06□□□□□ -1.92
ITGB1-208ENST00000464001 AQRO60306 1485 aaKnown RBP eCLIP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 A0A0A6YYH2 397 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 A0A1W2PRF3 423 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 A0A1W2PRM7 423 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 OR6C70A6NIJ9 312 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 A6NJ64 397 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 IDSB3KWA1 339 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 TRDCB7Z8K6 153 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 GOLGA8MH3BSY2 632 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 PLPP1O14494 284 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 SLC9A3R1O14745 358 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 LYPD3O95274 346 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 PLEKHA8P1O95397 391 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 CLIC3O95833 236 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 FGGP02679 453 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 RPLP0P05388 317 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 ZBTB25P24278 435 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 HLA-DMAP28067 261 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 CALCRP30988 508 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 FGF9P31371 208 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 GPR183P32249 361 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 KDELR2P33947 212 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 TNFSF9P41273 254 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 DAP3P51398 398 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 RIDAP52758 137 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 LIM2P55344 173 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 SARNPP82979 210 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 PITPNAQ00169 270 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 C2orf80Q0P641 193 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 EMC2Q15006 297 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 MAD2L1BPQ15013 274 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 OXA1LQ15070 435 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 DGUOKQ16854 277 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 ATAD3CQ5T2N8 411 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 RFWD3Q6PCD5 774 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 FAM199XQ6PEV8 388 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 SPESP1Q6UW49 350 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 CD300LGQ6UXG3 332 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 Q6ZVH6 145 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 CRLF3Q8IUI8 442 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 MREGQ8N565 214 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 MDS2Q8NDY4 140 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 OR5M1Q8NGP8 315 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 OR6N2Q8NGY6 317 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 SSC4DQ8WTU2 575 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 CENPNQ96H22 339 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 ZIM3Q96PE6 472 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 TMEM59Q9BXS4 323 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 NAT10Q9H0A0 1025 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 REEP4Q9H6H4 257 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 NT5DC2Q9H857 520 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 PLEKHA1Q9HB21 404 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 PATZ1Q9HBE1 687 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 VCX3AQ9NNX9 186 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 RMND1Q9NWS8 449 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 THUMPD1Q9NXG2 353 aaKnown RBP3.05□□□□□ -1.92
ITGB1-208ENST00000464001 IL37Q9NZH6 218 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 MAT2BQ9NZL9 334 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 NTNG1Q9Y2I2 539 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 LRRC42Q9Y546 428 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 CDH10Q9Y6N8 788 aa3.05□□□□□ -1.92
ITGB1-208ENST00000464001 EVC2Q86UK5 1308 aa3.04□□□□□ -1.92
ITGB1-208ENST00000464001 MTCL1Q9Y4B5 1905 aaKnown RBP3.04□□□□□ -1.92
ITGB1-208ENST00000464001 TMEM213A2RRL7 107 aa3.04□□□□□ -1.92
ITGB1-208ENST00000464001 TVP23AA6NH52 213 aa3.04□□□□□ -1.92
ITGB1-208ENST00000464001 OR5B21A6NL26 309 aa3.04□□□□□ -1.92
ITGB1-208ENST00000464001 E7ESA3 106 aa3.04□□□□□ -1.92
ITGB1-208ENST00000464001 E9PAM4 449 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms