RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 UBL4AP11441 157 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 GABRA1P14867 456 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ANPEPP15144 967 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF26P17031 533 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 NAGAP17050 411 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 CCNA2P20248 432 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 PRKACGP22612 351 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 PSMA4P25789 261 aaKnown RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 RRM2P31350 389 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ASCL1P50553 236 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 CCR4P51679 360 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 CDH12P55289 794 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 CLDN15P56746 228 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 RGS8P57771 180 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 SORDQ00796 357 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 EGR4Q05215 589 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 QPRTQ15274 297 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OR1Q1Q15612 314 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 HSPB2Q16082 182 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 EXOC3L2Q2M3D2 409 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 EIPR1Q53HC9 387 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ENTPD8Q5MY95 495 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 C1orf185Q5T7R7 199 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 INTS11Q5TA45 600 aaKnown RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OPN5Q6U736 354 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 RTL4Q6ZR62 310 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 NUP54Q7Z3B4 507 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 PEX5LQ8IYB4 626 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 CADM2Q8N3J6 435 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 TMCO5AQ8N6Q1 288 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF527Q8NB42 609 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OR9Q2Q8NGE9 314 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OR52J3Q8NH60 311 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 PFN4Q8NHR9 129 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 LINC01560Q8TB33 94 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 GPR119Q8TDV5 335 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ADAMTS16Q8TE57 1224 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM255BQ8WV15 326 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OIT3Q8WWZ8 545 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 C3orf49Q96BT1 292 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 JSRP1Q96MG2 331 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 DACH2Q96NX9 599 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 RAB3IPQ96QF0 476 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 MCHR1Q99705 422 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 SLC29A1Q99808 456 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 OR11A1Q9GZK7 315 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 UBQLN3Q9H347 655 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM185BQ9H7F4 350 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 METTL7AQ9H8H3 244 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 IL1RAPQ9NPH3 570 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 POLE3Q9NRF9 147 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 C20orf141Q9NUB4 165 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ACER3Q9NUN7 267 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 THUMPD1Q9NXG2 353 aaKnown RBP3.18□□□□□ -1.9
SCFD1-204ENST00000463622 KLRF1Q9NZS2 232 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 SEC14L4Q9UDX3 406 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ACAD8Q9UKU7 415 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 VDAC3Q9Y277 283 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 LYVE1Q9Y5Y7 322 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ENPP4Q9Y6X5 453 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 ARID1AO14497 2285 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 MED12Q93074 2177 aa3.18□□□□□ -1.9
SCFD1-204ENST00000463622 IGLV3-32A0A0A0MS00 114 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 A0A0B4J2E0 115 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 A0A1B0GX12 115 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM72A0PK05 275 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 DPPA5A6NC42 116 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SYNDIG1LA6NDD5 238 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TTC36A6NLP5 189 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 RHODO00212 210 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 KPNA4O00629 521 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PHF1O43189 567 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF264O43296 627 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 DHHO43323 396 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZIC3O60481 467 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 HCN1O60741 890 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 RAMP1O60894 148 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 FABP3P05413 133 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 GPIP06744 558 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 CNR1P21554 472 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TNFSF4P23510 183 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TIMP3P35625 211 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 POLR2IP36954 125 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 MAGEA5P43359 124 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 IDH2P48735 452 aaKnown RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 STARP49675 285 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SPIBQ01892 262 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 EFR3AQ14156 821 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC10A1Q14973 349 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ATP6AP1Q15904 470 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 LRRC36Q1X8D7 754 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM44Q2T9K0 475 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 PLPPR5Q32ZL2 321 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ASPHD1Q5U4P2 390 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 SLC22A10Q63ZE4 541 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TIGD3Q6B0B8 471 aa3.17□□□□□ -1.9
SCFD1-204ENST00000463622 ZNF770Q6IQ21 691 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-204ENST00000463622 TMEM81Q6P7N7 255 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms