RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 MR1Q95460 341 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 FLYWCH2Q96CP2 140 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 TRIM44Q96DX7 344 aaPredicted RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 MED8Q96G25 268 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 ITCHQ96J02 903 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 PRRT1Q99946 306 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 NUDT16L1Q9BRJ7 211 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 SEC22CQ9BRL7 303 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 CHMP4AQ9BY43 222 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 RACGAP1Q9H0H5 632 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 OR10A4Q9H209 315 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 SMYD3Q9H7B4 428 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 METTL17Q9H7H0 456 aaPredicted RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 NUDT15Q9NV35 164 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 MRPL39Q9NYK5 338 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 SEPT10Q9P0V9 454 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 XCL2Q9UBD3 114 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 ENOPH1Q9UHY7 261 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 HOOK1Q9UJC3 728 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 ANKRD12Q6UB98 2062 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 FMN2Q9NZ56 1722 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 SIP14410 1827 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 TSC2P49815 1807 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 CECR2Q9BXF3 1484 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 BAZ2AQ9UIF9 1905 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 SPTBN1Q01082 2364 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 PHF3Q92576 2039 aaKnown RBP-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 TET3O43151 1660 aa-0.62□□□□□ -2.51
TMEM56-204ENST00000463375 AKAP6Q13023 2319 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 UTRNP46939 3433 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 TNRC6AQ8NDV7 1962 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 KIAA1671Q9BY89 1806 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 MICAL3Q7RTP6 2002 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 TMEM89A2RUT3 159 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 C19orf71A6NCJ1 209 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ANKRD30BLA7E2S9 258 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 E9PMD0 336 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 SGK494L7N484 410 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 MANBAO00462 879 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ZSCAN12O43309 604 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ZBTB14O43829 449 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 FKBP6O75344 327 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 H6PDO95479 791 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 AIFM1O95831 613 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 OXTP01178 125 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 IGKV1D-33P01593 117 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 IGKV1-33P01594 117 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 IGKV1-5P01602 117 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CD8AP01732 235 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 HLA-DQB1P01920 261 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 HLA-DPB1P04440 258 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 UROSP10746 265 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 VCLP18206 1134 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 PAX7P23759 505 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 BMI1P35226 326 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 G6PCP35575 357 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 SOX6P35712 828 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 SERPINB8P50452 374 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 SPINK7P58062 85 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CNBPP62633 177 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ASIC1P78348 528 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CUL1Q13616 776 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 POU2AF1Q16633 256 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 KBTBD12Q3ZCT8 623 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 Q5VV11 94 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CAVIN1Q6NZI2 390 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 PLBD1Q6P4A8 553 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 HAGHLQ6PII5 290 aaPredicted RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 AFTPHQ6ULP2 937 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 LINC00696Q6ZRV3 163 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 LANCL3Q6ZV70 420 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 APTXQ7Z2E3 356 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 VPS36Q86VN1 386 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 GID4Q8IVV7 300 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 SGPP2Q8IWX5 399 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 UNC45BQ8IWX7 931 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CLYBLQ8N0X4 340 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 SLC25A45Q8N413 288 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ZDHHC22Q8N966 263 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 VN1R2Q8NFZ6 395 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CACNG8Q8WXS5 425 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 PPP1R14BQ96C90 147 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 PAGE5Q96GU1 130 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 NAP1L3Q99457 506 aaPredicted RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 C1orf50Q9BV19 199 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 OSBPL8Q9BZF1 889 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 TRPV5Q9NQA5 729 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 MYEF2Q9P2K5 600 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 COPS7AQ9UBW8 275 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 PSG8Q9UQ74 426 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 FARSAQ9Y285 508 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 YARS2Q9Y2Z4 477 aaKnown RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 COMMD3-BMI1R4GMX3 469 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 BRD4O60885 1362 aaPredicted RBP-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 ADAMTS7Q9UKP4 1686 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 PLXNA4Q9HCM2 1894 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 WDFY3Q8IZQ1 3526 aa-0.63□□□□□ -2.51
TMEM56-204ENST00000463375 CRB1P82279 1406 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 FHOD3Q2V2M9 1422 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms