RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 YIPF7Q8N8F6 280 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 GDPD1Q8N9F7 314 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 OR1J4Q8NGS1 313 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-213ENST00000462730 ADAMTS14Q8WXS8 1223 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 NTNG2Q96CW9 530 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 DIRAS2Q96HU8 199 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 GNRHR2Q96P88 292 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 MNTQ99583 582 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 TTYH2Q9BSA4 534 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 TSPAN10Q9H1Z9 355 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-213ENST00000462730 PPIL3Q9H2H8 161 aaKnown RBP12.97□□□□□ -0.33
HDAC6-213ENST00000462730 MRM2Q9UI43 246 aaKnown RBP12.97□□□□□ -0.33
HDAC6-213ENST00000462730 DKKL1Q9UK85 242 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 RABL2BQ9UNT1 228 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 GVINP1Q7Z2Y8 2422 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
HDAC6-213ENST00000462730 A0A1W2PNV4 684 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 SEC14L5O43304 696 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 TMCC2O75069 709 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 SERPINA3P01011 423 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 YES1P07947 543 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 PSKH1P11801 424 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 MYL9P24844 172 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 TMEM176BQ3YBM2 270 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 DDI2Q5TDH0 399 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 OTPQ5XKR4 325 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 WDFY1Q8IWB7 410 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 RDH10Q8IZV5 341 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 GTPBP8Q8N3Z3 284 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 SLC7A6Q92536 515 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 KIAA1143Q96AT1 154 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 RNF170Q96K19 258 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 SGCZQ96LD1 299 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 TMEM246Q9BRR3 403 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 C11orf54Q9H0W9 315 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 RYDENQ9NUL5 291 aaKnown RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 MED29Q9NX70 200 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 PAQR5Q9NXK6 330 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 IKZF2Q9UKS7 526 aa12.96□□□□□ -0.33
HDAC6-213ENST00000462730 CNOT1A5YKK6 2376 aaKnown RBP12.96□□□□□ -0.33
HDAC6-213ENST00000462730 NPIPB13A6NJU9 1138 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 NOTOA8MTQ0 251 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 NPIPB4C9JG80 1138 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 SC5DO75845 299 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 RPP14O95059 124 aaKnown RBP12.96□□□□□ -0.34
HDAC6-213ENST00000462730 CD1AP06126 327 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 TACSTD2P09758 323 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 DSCR4P56555 118 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-213ENST00000462730 ETFDHQ16134 617 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 FAM205BPQ63HN1 556 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 TMPRSS7Q7RTY8 843 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 PXKQ7Z7A4 578 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 THEM6Q8WUY1 208 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 TMEM41AQ96HV5 264 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 IP6K3Q96PC2 410 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 ATF6BQ99941 703 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 PDCD1LG2Q9BQ51 273 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 GON7Q9BXV9 100 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 KCNG2Q9UJ96 466 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 ING1Q9UK53 422 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-213ENST00000462730 HDGFL3Q9Y3E1 203 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 BOLA1Q9Y3E2 137 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 TMEM14AQ9Y6G1 99 aa12.96□□□□□ -0.34
HDAC6-213ENST00000462730 A0A0G2JMM0 328 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 A0A1W2PPB8 328 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 A0A1W2PRS3 328 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 KIR3DP1A8MWS1 328 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 PHYHO14832 338 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 ABHD16AO95870 558 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 P04436 131 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 ALOX5APP20292 161 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 ITGA3P26006 1051 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 CRABP1P29762 137 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 BLVRAP53004 296 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 FMODQ06828 376 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 RAET1LQ5VY80 246 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 JMJD6Q6NYC1 403 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-213ENST00000462730 LRRC69Q6ZNQ3 347 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 KCTD20Q7Z5Y7 419 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 ALPK2Q86TB3 2170 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 LIX1LQ8IVB5 337 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 RPS4Y2Q8TD47 263 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 RNF166Q96A37 237 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-213ENST00000462730 RANGRFQ9HD47 186 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-213ENST00000462730 PLSCR3Q9NRY6 295 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
HDAC6-213ENST00000462730 DLL3Q9NYJ7 618 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 COMMD3Q9UBI1 195 aa12.95□□□□□ -0.34
HDAC6-213ENST00000462730 NUFIP1Q9UHK0 495 aaKnown RBP12.95□□□□□ -0.34
HDAC6-213ENST00000462730 A0A0B4J293 547 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 ZNF593O00488 134 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-213ENST00000462730 GPRIN2O60269 458 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 UPK3AO75631 287 aa12.94□□□□□ -0.34
HDAC6-213ENST00000462730 SPARCP09486 303 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms