RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 DLX5P56178 289 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 CXCR4P61073 352 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OC90Q02509 493 aaPredicted RBP6.54□□□□□ -1.36
UBE4B-204ENST00000462658 SRSF6Q13247 344 aaKnown RBP6.54□□□□□ -1.36
UBE4B-204ENST00000462658 INPP5JQ15735 1006 aaPredicted RBP6.54□□□□□ -1.36
UBE4B-204ENST00000462658 ZBED5Q49AG3 693 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 KCTD21Q4G0X4 260 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 C12orf73Q69YU5 71 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 LAIR2Q6ISS4 152 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 ACSM5Q6NUN0 579 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 RPL13AP3Q6NVV1 102 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 SLC27A4Q6P1M0 643 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 ARSKQ6UWY0 536 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 CASP12Q6UXS9 341 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 ZNF620Q6ZNG0 422 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 RNF144BQ7Z419 303 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OAFQ86UD1 273 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 PLCZ1Q86YW0 608 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 IQCF1Q8N6M8 205 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 C10orf53Q8N6V4 93 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 CLDN22Q8N7P3 220 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 FADS6Q8N9I5 356 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 BPIFB6Q8NFQ5 453 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OR2M3Q8NG83 312 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OR8D4Q8NGM9 314 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OR1J4Q8NGS1 313 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OR13C2Q8NGS9 318 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OR51A7Q8NH64 312 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 FAM110DQ8TAY7 271 aaPredicted RBP6.54□□□□□ -1.36
UBE4B-204ENST00000462658 FANK1Q8TC84 345 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 TRUB1Q8WWH5 349 aaKnown RBP6.54□□□□□ -1.36
UBE4B-204ENST00000462658 NTNG2Q96CW9 530 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 SAMD8Q96LT4 415 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 TNFRSF13CQ96RJ3 184 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 UTP23Q9BRU9 249 aaKnown RBP6.54□□□□□ -1.36
UBE4B-204ENST00000462658 TEX12Q9BXU0 123 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 OR52D1Q9H346 318 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 PTGES2Q9H7Z7 377 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 SLC25A19Q9HC21 320 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 PROK2Q9HC23 129 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 MED17Q9NVC6 651 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 ZNF226Q9NYT6 803 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 TVP23BQ9NYZ1 205 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 LUZP4Q9P127 313 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 AASSQ9UDR5 926 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 FBXL2Q9UKC9 423 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 VDAC3Q9Y277 283 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 SIGLEC7Q9Y286 467 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 TMED7Q9Y3B3 224 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 CDH10Q9Y6N8 788 aa6.54□□□□□ -1.36
UBE4B-204ENST00000462658 MGAQ8IWI9 3026 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 PTPRQQ9UMZ3 2332 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TRAV36DV7A0A075B6V5 113 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TRAV27A0A087WT01 109 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TMEM72A0PK05 275 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 A6NL46 340 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 A8MVM7 634 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 LRRN3E7EW58 273 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 G3V3Y1 287 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 M0R129 80 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SLC1A7O00341 560 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 XPNPEP2O43895 674 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 WBP4O75554 376 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CBR3O75828 277 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 F10P00742 488 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 HMGN1P05114 100 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CCDC159P0C7I6 412 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 GABRB1P18505 474 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CNR1P21554 472 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CRHBPP24387 322 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 EEF1B2P24534 225 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 RPS5P46782 204 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SLC9A3P48764 834 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 PCYT1AP49585 367 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CDH15P55291 814 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 FXYD6P3P58550 94 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SNRPGP62308 76 aaKnown RBP6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CSNK2BP67870 215 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 EGR4Q05215 589 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 LTBQ06643 244 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 FOXF1Q12946 379 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SNAPC1Q16533 368 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 ZNF74Q16587 644 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SLC25A53Q5H9E4 307 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 CLEC12AQ5QGZ9 265 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 AGAP7PQ5VUJ5 663 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SPINK14Q6IE38 97 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 MTFR2Q6P444 385 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SMARCD3Q6STE5 483 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 LINC00696Q6ZRV3 163 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 SLC46A3Q7Z3Q1 461 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 LRRC17Q8N6Y2 441 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TCEANCQ8N8B7 351 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 TSPAN14Q8NG11 270 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 OR2T33Q8NG76 320 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 OR52L1Q8NGH7 329 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 OR8J1Q8NGP2 316 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 OR4Q3Q8NH05 313 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 APH1BQ8WW43 257 aa6.53□□□□□ -1.36
UBE4B-204ENST00000462658 LIPHQ8WWY8 451 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms