RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ACTC1P68032 377 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 ACTA1P68133 377 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 SLC35A2P78381 396 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 ROR2Q01974 943 aaKnown RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 TLE1Q04724 770 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 ZNF91Q05481 1191 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 FAM27BQ5VT28 67 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 SHFQ7M4L6 423 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 SSX8Q7RTT4 187 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 SLC16A9Q7RTY1 509 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 GCNT2Q8N0V5 402 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 UBE2J2Q8N2K1 259 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 ZNF540Q8NDQ6 660 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 C1orf162Q8NEQ5 155 aaPredicted RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 BBS1Q8NFJ9 593 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 SLC26A10Q8NG04 563 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 OR6K6Q8NGW6 343 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 OR2T27Q8NH04 317 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 ASB5Q8WWX0 329 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 RNFT2Q96EX2 444 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 TSSK2Q96PF2 358 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 BBC3Q96PG8 261 aaPredicted RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 INTS14Q96SY0 518 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 CNN2Q99439 309 aaKnown RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 RBM24Q9BX46 236 aaKnown RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 JAM3Q9BX67 310 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 HCAR1Q9BXC0 346 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 HDHD5Q9BXW7 423 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 ZNF696Q9H7X3 374 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 MED20Q9H944 212 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 GPR35Q9HC97 309 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 MOV10Q9HCE1 1003 aaKnown RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 FGF20Q9NP95 211 aaPredicted RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 SLC7A10Q9NS82 523 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 FKBP14Q9NWM8 211 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 CHCHD3Q9NX63 227 aaKnown RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 EXOGQ9Y2C4 368 aaKnown RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 COA3Q9Y2R0 106 aaPredicted RBP9.42□□□□□ -0.9
RTF1-202ENST00000462276 PCDHGB5Q9Y5G0 923 aa9.42□□□□□ -0.9
RTF1-202ENST00000462276 MAGEA13PA6NCF6 341 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 C12orf71A8MTZ7 269 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 PTGES3LE9PB15 166 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 DCTN6O00399 190 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 CCL21O00585 134 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 PHYHO14832 338 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 HLA-DQA2P01906 255 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 GYPBP06028 91 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 SBK2P0C263 348 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 OR8G3PP0DMU2 310 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 CLUP10909 449 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 MSR1P21757 451 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 PYCR1P32322 319 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 CAPZA2P47755 286 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 PCBD1P61457 104 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 SIRPAP78324 504 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 ST3GAL4Q11206 333 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 FOXF2Q12947 444 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 SMN1Q16637 294 aaKnown RBP9.41□□□□□ -0.9
RTF1-202ENST00000462276 PCK2Q16822 640 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 SLC25A35Q3KQZ1 300 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 OR7E24Q6IFN5 339 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 PLXDC2Q6UX71 529 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 RHOUQ7L0Q8 258 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 PRSS48Q7RTY5 328 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 BCDIN3DQ7Z5W3 292 aaKnown RBP9.41□□□□□ -0.9
RTF1-202ENST00000462276 BTLAQ7Z6A9 289 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 MRGPRGQ86SM5 289 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 SYT9Q86SS6 491 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 TIGD4Q8IY51 512 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 ZNF843Q8N446 348 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 STX19Q8N4C7 294 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 ACBD7Q8N6N7 88 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 OR10H5Q8NGA6 315 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 ASB17Q8WXJ9 295 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 NSMAFQ92636 917 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 GGHQ92820 318 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 KISS1RQ969F8 398 aaPredicted RBP9.41□□□□□ -0.9
RTF1-202ENST00000462276 TMEM80Q96HE8 168 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 FOXB1Q99853 325 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 COPS4Q9BT78 406 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 KCNN2Q9H2S1 579 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 NELFAQ9H3P2 528 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 RERGLQ9H628 205 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 C12orf49Q9H741 205 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 POLE4Q9NR33 117 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 TMEM38BQ9NVV0 291 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 ELOVL5Q9NYP7 299 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 TAS2R16Q9NYV7 291 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 COQ3Q9NZJ6 369 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 DIMT1Q9UNQ2 313 aaKnown RBP9.41□□□□□ -0.9
RTF1-202ENST00000462276 EXOSC1Q9Y3B2 195 aaKnown RBP9.41□□□□□ -0.9
RTF1-202ENST00000462276 UGT2A1Q9Y4X1 527 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 BSNQ9UPA5 3926 aa9.41□□□□□ -0.9
RTF1-202ENST00000462276 GTF3C1Q12789 2109 aa9.4□□□□□ -0.9
RTF1-202ENST00000462276 A0A0G2JNJ9 132 aa9.4□□□□□ -0.9
RTF1-202ENST00000462276 A8MXE2 369 aa9.4□□□□□ -0.9
RTF1-202ENST00000462276 J3QRE1 110 aa9.4□□□□□ -0.9
RTF1-202ENST00000462276 RGS10O43665 173 aa9.4□□□□□ -0.9
RTF1-202ENST00000462276 XPNPEP2O43895 674 aa9.4□□□□□ -0.9
RTF1-202ENST00000462276 RAB36O95755 333 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms