RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 RNF186Q9NXI6 227 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ETV7Q9Y603 341 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 P2RX6O15547 441 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF208O43345 1280 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 VEGFDO43915 354 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 THBS1P07996 1170 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 EIF2S3LQ2VIR3 472 aaKnown RBP10.61□□□□□ -0.71
CPSF3-202ENST00000460593 CORO6Q6QEF8 472 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 UQCC3Q6UW78 93 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
CPSF3-202ENST00000460593 DMBX1Q8NFW5 382 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 CCDC107Q8WV48 283 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ARL11Q969Q4 196 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 C1orf198Q9H425 327 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TBC1D3DA0A087WVF3 549 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TBC1D3IA0A087WXS9 549 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 DCDC2BA2VCK2 349 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 EFCAB7A8K855 629 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TBC1D3LB9A6J9 549 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 SNAPC5O75971 98 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TBC1D3HP0C7X1 549 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 NQO2P16083 231 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ACAA2P42765 397 aaKnown RBP10.61□□□□□ -0.71
CPSF3-202ENST00000460593 MST1LQ2TV78 715 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF684Q5T5D7 378 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ASPHD2Q6ICH7 369 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TBC1D3CQ6IPX1 549 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF813Q6ZN06 617 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 DGAT2L6Q6ZPD8 337 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TBC1D3Q8IZP1 549 aaPredicted RBP10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ACBD4Q8NC06 268 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF251Q9BRH9 671 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 TAS2R8Q9NYW2 309 aa10.61□□□□□ -0.71
CPSF3-202ENST00000460593 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 FGF17O60258 216 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF735P0CB33 412 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CPT2P23786 658 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 AIMP2Q13155 320 aaKnown RBP10.6□□□□□ -0.71
CPSF3-202ENST00000460593 GGTLC2Q14390 218 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 USP53Q70EK8 1073 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 OR2G2Q8NGZ5 317 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CXorf40AQ8TE69 158 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 GPX8Q8TED1 209 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 PIK3IP1Q96FE7 263 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 NRIP2Q9BQI9 281 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CHRDQ9H2X0 955 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 KLK13Q9UKR3 277 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CARHSP1Q9Y2V2 147 aaKnown RBP10.6□□□□□ -0.71
CPSF3-202ENST00000460593 A6NLC8 198 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 HOXA2O43364 376 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 IGKV1D-16P01601 117 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 SFTA3P0C7M3 94 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 LAG3P18627 525 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 RPS4Y1P22090 263 aaKnown RBP10.6□□□□□ -0.71
CPSF3-202ENST00000460593 ABCD3P28288 659 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 WASP42768 502 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 RAB5BP61020 215 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CXADRP78310 365 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 RIPPLY1Q0D2K3 151 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CDNFQ49AH0 187 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 PPP1R3BQ86XI6 285 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 MISPQ8IVT2 679 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 OR51A2Q8NGJ7 313 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 FAM174AQ8TBP5 190 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 LRRC3BQ96PB8 259 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 PCDHGA1Q9Y5H4 931 aa10.6□□□□□ -0.71
CPSF3-202ENST00000460593 hCG_1809904A0A1W2PP81 198 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 A0A1W2PR64 198 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 A0A1W2PRV1 198 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 CST5P28325 142 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-202ENST00000460593 CD80P33681 288 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 KIR3DL2P43630 455 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 CENPAP49450 140 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 OR2B8PP59922 312 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 IL13RA1P78552 427 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 ECH1Q13011 328 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 CLINT1Q14677 625 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 CEBPEQ15744 281 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 KRBOX4Q5JUW0 171 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 MDGA2Q7Z553 956 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 PAQR4Q8N4S7 273 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-202ENST00000460593 SUSD6Q92537 303 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 MRGPRFQ96AM1 343 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 POTEKPQ9BYX7 375 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 RHOFQ9HBH0 211 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 TRBV5-5A0A0J9YX44 114 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF736B4DX44 427 aaPredicted RBP10.59□□□□□ -0.71
CPSF3-202ENST00000460593 FGF16O43320 207 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 GLCEO94923 617 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 SERPINA5P05154 406 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 NME2P22392 152 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 TAS2R19P59542 299 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 ZNF345Q14585 488 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 RAB11BQ15907 218 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 WDR38Q5JTN6 314 aa10.59□□□□□ -0.71
CPSF3-202ENST00000460593 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms