RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 FZR1Q9UM11 496 aa16.27■□□□□ 0.2
COL5A1-203ENST00000460264 ATRQ13535 2644 aa16.27■□□□□ 0.19
COL5A1-203ENST00000460264 IGHV4-61A0A0C4DH41 118 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 GMNCA6NCL1 334 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 CDC42EP2O14613 210 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 SNAP29O95721 258 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
COL5A1-203ENST00000460264 GIFP27352 417 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 GPR4P46093 362 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 PLP2Q04941 152 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 TBC1D28Q2M2D7 210 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 TMPRSS11FQ6ZWK6 438 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 FAM86B1Q8N7N1 296 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 CLDN22Q8N7P3 220 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 FAM156AQ8NDB6 213 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 NSMAFQ92636 917 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 BPESC1Q9GZL8 116 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 ADA2Q9NZK5 511 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 REV1Q9UBZ9 1251 aa16.26■□□□□ 0.19
COL5A1-203ENST00000460264 A6NIZ1 184 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 STAMBPO95630 424 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 PTHP01270 115 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 FAM157BP0CG42 384 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 ALDH3B1P43353 468 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 GYS2P54840 703 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 RAP1BP61224 184 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 RAP1AP62834 184 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 MAD2L1BPQ15013 274 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-203ENST00000460264 PABPC1L2AQ5JQF8 200 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 THEM4Q5T1C6 240 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 CYB5R2Q6BCY4 276 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 GLYATQ6IB77 296 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF786Q8N393 782 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 RNF148Q8N7C7 305 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF540Q8NDQ6 660 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 OR1J2Q8NGS2 313 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 FNDC8Q8TC99 324 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 SLC7A13Q8TCU3 470 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 DCAF13Q9NV06 445 aaKnown RBP16.25■□□□□ 0.19
COL5A1-203ENST00000460264 NDUFAF4Q9P032 175 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 TMEM5Q9Y2B1 443 aa16.25■□□□□ 0.19
COL5A1-203ENST00000460264 IQCMA0A1B0GVH7 501 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 A0A1W2PRQ8 180 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 SLC22A23A1A5C7 686 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 H1F0P07305 194 aaKnown RBP16.24■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF26P17031 533 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF32P17041 273 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 APEX1P27695 318 aaKnown RBP16.24■□□□□ 0.19
COL5A1-203ENST00000460264 GZMKP49863 264 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 HSF2Q03933 536 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 DGCR6Q14129 220 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 IQCCQ4KMZ1 466 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 RGS7BPQ6MZT1 257 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-203ENST00000460264 PODNL1Q6PEZ8 512 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 ARIH2OSQ8N7S6 290 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 CPEB3Q8NE35 698 aaKnown RBP16.24■□□□□ 0.19
COL5A1-203ENST00000460264 UBASH3BQ8TF42 649 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 C7orf34Q96L11 122 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 RBP7Q96R05 134 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 LRMDAQ9H2I8 198 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 KCNN2Q9H2S1 579 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 OR51B6Q9H340 312 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 MS4A5Q9H3V2 200 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 CCNB1IP1Q9NPC3 277 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 DUSP13Q9UII6 198 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 SAMD4AQ9UPU9 718 aaKnown RBP16.24■□□□□ 0.19
COL5A1-203ENST00000460264 ADAM18Q9Y3Q7 739 aa16.24■□□□□ 0.19
COL5A1-203ENST00000460264 MXRA5Q9NR99 2828 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 A0A1W2PPW3 197 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 APEHP13798 732 aaKnown RBP16.23■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF23P17027 643 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 RHCEP18577 417 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 APLNRP35414 380 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 ERVS71-1P61550 626 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 ERVK-25P63136 954 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 GNGT1P63211 74 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 SGCAQ16586 387 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 CHRFAM7AQ494W8 412 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 ZBED5Q49AG3 693 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 FGD3Q5JSP0 725 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 FAM27BQ5VT28 67 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 FOXL2NBQ6ZUU3 175 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 RRM2BQ7LG56 351 aa16.23■□□□□ 0.19
COL5A1-203ENST00000460264 FAM46AQ96IP4 442 aaKnown RBP16.23■□□□□ 0.19
COL5A1-203ENST00000460264 FAM32AQ9Y421 112 aaKnown RBP16.23■□□□□ 0.19
COL5A1-203ENST00000460264 H7C1C5 153 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 GMNNO75496 209 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 CD14P08571 375 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 HSD17B1P14061 328 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 ZNF250P15622 560 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 TCN1P20061 433 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-203ENST00000460264 RPL4P36578 427 aaKnown RBP16.22■□□□□ 0.19
COL5A1-203ENST00000460264 LIMS1P48059 325 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 KLF3P57682 345 aaPredicted RBP16.22■□□□□ 0.19
COL5A1-203ENST00000460264 LCN6P62502 163 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 RIN1Q13671 783 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 FAM122BQ7Z309 247 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 PGAM4Q8N0Y7 254 aa16.22■□□□□ 0.19
COL5A1-203ENST00000460264 MSI2Q96DH6 328 aaKnown RBP16.22■□□□□ 0.19
COL5A1-203ENST00000460264 DHRS1Q96LJ7 313 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms