RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 FIGLAQ6QHK4 219 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 PRSS41Q7RTY9 318 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SHISA5Q8N114 240 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CA13Q8N1Q1 262 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ZNF614Q8N883 585 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ZNF511Q8NB15 262 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 OR52R1Q8NGF1 315 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 OR51S1Q8NGJ8 323 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 GPX8Q8TED1 209 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CCDC107Q8WV48 283 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TNFAIP8L1Q8WVP5 186 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 THRSPQ92748 146 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 FAM131CQ96AQ9 280 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 OR2M4Q96R27 311 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SLC17A9Q9BYT1 436 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CXXC1Q9P0U4 656 aaPredicted RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 HIF3AQ9Y2N7 669 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 COL5A1P20908 1838 aaPredicted RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 A0A1B0GTI1 187 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 PRSS38A1L453 326 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SULT1C2O00338 296 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 APOC3P02656 99 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 MAS1P04201 325 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CD14P08571 375 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SLC35E2P0CK97 266 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 GTF2F2P13984 249 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TMEM11P17152 192 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 PRSS3P35030 304 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SOX2P48431 317 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 MMP16P51512 607 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ACTBP60709 375 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ACTG1P63261 375 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 EGR3Q06889 387 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 C21orf62-AS1Q17RA5 79 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 FAM166AQ6J272 317 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 FDX2Q6P4F2 183 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 VITQ6UXI7 678 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 DGAT2L6Q6ZPD8 337 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 BIVMQ86UB2 503 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CACUL1Q86Y37 369 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TMEFF1Q8IYR6 380 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 KCNRGQ8N5I3 272 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 OR4N2Q8NGD1 307 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 OR10K1Q8NGX5 313 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 OR2G2Q8NGZ5 317 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 IFI44Q8TCB0 444 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 SPPL3Q8TCT6 385 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 GPR148Q8TDV2 347 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 TMEM106AQ96A25 262 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 C3orf49Q96BT1 292 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 PHYHIPLQ96FC7 376 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ADAD1Q96M93 576 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 ASB16Q96NS5 453 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ZFYVE21Q9BQ24 234 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 PAPOLGQ9BWT3 736 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 GPR174Q9BXC1 333 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CHST6Q9GZX3 395 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 COMMD4Q9H0A8 199 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ESRP2Q9H6T0 727 aaKnown RBP7.7□□□□□ -1.18
VPS50-208ENST00000458707 FGF22Q9HCT0 170 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 ACTR10Q9NZ32 417 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 UPB1Q9UBR1 384 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 CACNA1CQ13936 2221 aa7.7□□□□□ -1.18
VPS50-208ENST00000458707 IGKV1D-42A0A075B6H8 117 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 A0A1W2PQU0 124 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 OR6C74A6NCV1 312 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 ZNF729A6NN14 1252 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 H0YGG7 62 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 TEX46H3BTG2 121 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 SLC17A2O00624 439 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 PLRG1O43660 514 aaKnown RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 CDC40O60508 579 aaKnown RBP eCLIP7.69□□□□□ -1.18
VPS50-208ENST00000458707 SRPX2O60687 465 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 WNT11O96014 354 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 TIMP1P01033 207 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 HOXC4P09017 264 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 OR4E1P0C645 316 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 SLC25A4P12235 298 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 SDHAP31040 664 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 RPL35P42766 123 aaKnown RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 EFNB2P52799 333 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 RAB38P57729 211 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 ARF3P61204 181 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 GUCA2AQ02747 115 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 FGL1Q08830 312 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 RASGEF1BQ0VAM2 473 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 ZNHIT3Q15649 155 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 GXYLT1Q4G148 440 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 JMJD6Q6NYC1 403 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 STEAP1BQ6NZ63 245 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 LPCAT3Q6P1A2 487 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 C17orf107Q6ZR85 190 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 ZNF546Q86UE3 836 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 TMEM17Q86X19 198 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 PRSS35Q8N3Z0 413 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 C12orf45Q8N5I9 185 aaPredicted RBP7.69□□□□□ -1.18
VPS50-208ENST00000458707 TMEM229BQ8NBD8 167 aa7.69□□□□□ -1.18
VPS50-208ENST00000458707 RELL2Q8NC24 303 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms