RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SLC22A6Q4U2R8 563 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TMEM196Q5HYL7 178 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TSTD2Q5T7W7 516 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 AGAP6Q5VW22 663 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 STUMQ69YW2 141 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ZNF529Q6P280 563 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 FAHD1Q6P587 224 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 GJB7Q6PEY0 223 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 DRAM2Q6UX65 266 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TFAP2EQ6VUC0 442 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 KYAT3Q6YP21 454 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 UNC93AQ86WB7 457 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MEX3DQ86XN8 651 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 ARRDC1Q8N5I2 433 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ZNF611Q8N823 705 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 OR10G3Q8NGC4 313 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 OR4A4PQ8NGN8 299 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 OR4Q3Q8NH05 313 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 OR51F2Q8NH61 342 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 RNASEH2CQ8TDP1 164 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 GPR151Q8TDV0 419 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 AENQ8WTP8 325 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 CLEC4CQ8WTT0 213 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ISOC2Q96AB3 205 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 FKBP10Q96AY3 582 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 BPIFA2Q96DR5 249 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 NARS2Q96I59 477 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 TXNDC15Q96J42 360 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MAGEB18Q96M61 343 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 IL4I1Q96RQ9 567 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 CNN2Q99439 309 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 NDUFAF3Q9BU61 184 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 NXF2Q9GZY0 626 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 ESRP2Q9H6T0 727 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 ZNF556Q9HAH1 456 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 BEX1Q9HBH7 125 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 LANCL2Q9NS86 450 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TMEM181Q9P2C4 612 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 ZNF346Q9UL40 294 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 PYCARDQ9ULZ3 195 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 HHLA2Q9UM44 414 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 RPL26L1Q9UNX3 145 aaKnown RBP4.83□□□□□ -1.64
VPS41-209ENST00000457055 TFR2Q9UP52 801 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 TNNQ9UQP3 1299 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 SH2B3Q9UQQ2 575 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 RAP2CQ9Y3L5 183 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 CACNA1GO43497 2377 aa4.83□□□□□ -1.64
VPS41-209ENST00000457055 MED23Q9ULK4 1368 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 ZMYM6O95789 1325 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 A6NNC1 897 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 LEUTXA8MZ59 168 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 BLOC1S5-TXNDC5H3BN57 136 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 MGST3O14880 152 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 PPP1R2P9O14990 202 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 SLC16A5O15375 505 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 XPNPEP2O43895 674 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 HPGDSO60760 199 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 TRMUO75648 421 aaKnown RBP4.82□□□□□ -1.64
VPS41-209ENST00000457055 SLC22A5O76082 557 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 TMEM50AO95807 157 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 TSPAN13O95857 204 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 PTTG1O95997 202 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 OAS1P00973 400 aaKnown RBP4.82□□□□□ -1.64
VPS41-209ENST00000457055 ISG15P05161 165 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 HOXB5P09067 269 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 GZMHP20718 246 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 EPHA2P29317 976 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 DDTP30046 118 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 S100A11P31949 105 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 GYG1P46976 350 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 EFNA3P52797 238 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 TAS2R41P59536 307 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 OR2B8PP59922 312 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 ERVPABLB-1P60509 514 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 RPS20P60866 119 aaKnown RBP4.82□□□□□ -1.64
VPS41-209ENST00000457055 RAB10P61026 200 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 PKIAP61925 76 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 GNGT1P63211 74 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 CXADRP78310 365 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 ZNF616Q08AN1 781 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 ZP4Q12836 540 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 TRAF3Q13114 568 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 NME3Q13232 169 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 NFATC2Q13469 925 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 ABRAXAS2Q15018 415 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 HIST2H2ACQ16777 129 aaPredicted RBP4.82□□□□□ -1.64
VPS41-209ENST00000457055 GPR33Q49SQ1 333 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 SOWAHCQ53LP3 525 aaPredicted RBP4.82□□□□□ -1.64
VPS41-209ENST00000457055 ATAD3CQ5T2N8 411 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 PRAMEF17Q5VTA0 474 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 SAMD13Q5VXD3 122 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 LIPKQ5VXJ0 399 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 TMEM42Q69YG0 159 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 LCLAT1Q6UWP7 414 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 MBOAT1Q6ZNC8 495 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 C19orf35Q6ZS72 473 aa4.82□□□□□ -1.64
VPS41-209ENST00000457055 SLC36A1Q7Z2H8 476 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms