RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RBP7Q96R05 134 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 SIAEQ9HAT2 523 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 IL20Q9NYY1 176 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 IL20RAQ9UHF4 553 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 ITGB1BP2Q9UKP3 347 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 MOKQ9UQ07 419 aa12.29□□□□□ -0.44
HDAC4-205ENST00000454542 BHLHE40O14503 412 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 XKRYO14609 159 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 SMPD2O60906 423 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 PPP1R3DO95685 299 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 RAB36O95755 333 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 CST1P01037 141 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 GASTP01350 101 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 CRYAAP02489 173 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 TP53P04637 393 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-205ENST00000454542 CD79AP11912 226 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 CTLA4P16410 223 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 TTKP33981 857 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 PTH2RP49190 550 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 RPS6KA3P51812 740 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 RAB1AP62820 205 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
HDAC4-205ENST00000454542 HGFACQ04756 655 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 NPRL3Q12980 569 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 CD300LDQ6UXZ3 194 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 TMEM179BQ7Z7N9 219 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 DEPDC4Q8N2C3 294 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 IL17RDQ8NFM7 739 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 OR10G2Q8NGC3 310 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 UTP4Q969X6 686 aaKnown RBP12.28□□□□□ -0.44
HDAC4-205ENST00000454542 DUS3LQ96G46 650 aaKnown RBP12.28□□□□□ -0.44
HDAC4-205ENST00000454542 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 SAMD8Q96LT4 415 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 SH3GL3Q99963 347 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 PLA2G12AQ9BZM1 189 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 SYT4Q9H2B2 425 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 CXorf56Q9H5V9 222 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 ZNF442Q9H7R0 627 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 FAIMQ9NVQ4 179 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 IER3IP1Q9Y5U9 82 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 U3KQV3 271 aa12.28□□□□□ -0.44
HDAC4-205ENST00000454542 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
HDAC4-205ENST00000454542 SERPINA5P05154 406 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 CST2P09228 141 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 PATE4P0C8F1 98 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 ZNF35P13682 527 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 CDAP32320 146 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 CDKN2AP42771 156 aaKnown RBP12.27□□□□□ -0.45
HDAC4-205ENST00000454542 PTDSS1P48651 473 aaKnown RBP12.27□□□□□ -0.45
HDAC4-205ENST00000454542 CBX1P83916 185 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.45
HDAC4-205ENST00000454542 SLC36A2Q495M3 483 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 FAM27BQ5VT28 67 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 SLC16A14Q7RTX9 510 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 NSMAFQ92636 917 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 EGLN3Q9H6Z9 239 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 YY1AP1Q9H869 796 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 POLE4Q9NR33 117 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 CA10Q9NS85 328 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 CBLN4Q9NTU7 201 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 POU2F3Q9UKI9 436 aa12.27□□□□□ -0.45
HDAC4-205ENST00000454542 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 SOCS2O14508 198 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 IDH3BO43837 385 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 SNAP29O95721 258 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 GAAP10253 952 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 HIST1H1CP16403 213 aaKnown RBP12.26□□□□□ -0.45
HDAC4-205ENST00000454542 GSTM3P21266 225 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 MSR1P21757 451 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 APOBEC3AP31941 199 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-205ENST00000454542 PIGFQ07326 219 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 CCNIQ14094 377 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 RAB39AQ14964 217 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 ETFDHQ16134 617 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 AGAP6Q5VW22 663 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 TMEM53Q6P2H8 277 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 PRSS57Q6UWY2 283 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 MUC15Q8N387 334 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 GIPC3Q8TF64 312 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 FBXO17Q96EF6 278 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 ERMAPQ96PL5 475 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-205ENST00000454542 NIPSNAP1Q9BPW8 284 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 KCNS3Q9BQ31 491 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 WACQ9BTA9 647 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 RACGAP1Q9H0H5 632 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 C1orf198Q9H425 327 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 NTN4Q9HB63 628 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 DNAJB9Q9UBS3 223 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
HDAC4-205ENST00000454542 HIVEP1P15822 2718 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 DCTN6O00399 190 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 SCG5P05408 212 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 ZNF32P17041 273 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 LAP3P28838 519 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 FABP6P51161 128 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 ADAM8P78325 824 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 COX10Q12887 443 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 EFNB3Q15768 340 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms