RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLC17A1Q14916 467 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 SF3A2Q15428 464 aaKnown RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 TATDN3Q17R31 274 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 DCXRQ7Z4W1 244 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 ZNF679Q8IYX0 411 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 OR2M3Q8NG83 312 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 OR11G2Q8NGC1 345 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 ASB10Q8WXI3 467 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 PTGES2Q9H7Z7 377 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 SPATA2Q9UM82 520 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 CHCHD2Q9Y6H1 151 aaPredicted RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 URB1O60287 2271 aaKnown RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 FAM47E-STBD1D6RA91 191 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 PDCD5O14737 125 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 SEC14L5O43304 696 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 F10P00742 488 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 CCL3P10147 92 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 ADRA2CP18825 462 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 FOLR3P41439 243 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 DAP3P51398 398 aaKnown RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 CD83Q01151 205 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 KCNJ8Q15842 424 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 PYHIN1Q6K0P9 492 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 TRILQ7L0X0 811 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 LINGO2Q7L985 606 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 GPR148Q8TDV2 347 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 UPRTQ96BW1 309 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 MRGPRX4Q96LA9 322 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 PISDQ9UG56 409 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 ZNF221Q9UK13 617 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 EMC9Q9Y3B6 208 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 CPAMD8Q8IZJ3 1885 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 PHF3Q92576 2039 aaKnown RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 TRAV6A0A075B6T7 132 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 TMEM221A6NGB7 291 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 ZNF814B7Z6K7 855 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 M0R296 226 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 RAMP1O60894 148 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 STK17BO94768 372 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 ONECUT2O95948 504 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 HLA-DQB1P01920 261 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 TCN2P20062 427 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 PTBP1P26599 531 aaKnown RBP eCLIP10.55□□□□□ -0.722e-6■■■■□ 25.7
VTA1-203ENST00000452973 HOXD12P35452 270 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 TRA2AQ13595 282 aaKnown RBP eCLIP10.55□□□□□ -0.72
VTA1-203ENST00000452973 MFSD13AQ14CX5 517 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 C3orf33Q6P1S2 294 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 KCTD18Q6PI47 426 aaPredicted RBP10.55□□□□□ -0.72
VTA1-203ENST00000452973 OR2Y1Q8NGV0 311 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 C4orf45Q96LM5 186 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 FAM210AQ96ND0 272 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 KCNJ15Q99712 375 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 AUNIPQ9H7T9 357 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 LRP12Q9Y561 859 aa10.55□□□□□ -0.72
VTA1-203ENST00000452973 A0A1W2PPL8 197 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 TMEM212A6NML5 194 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 AIPO00170 330 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 CD1AP06126 327 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 MAPK3P27361 379 aaPredicted RBP10.54□□□□□ -0.72
VTA1-203ENST00000452973 MSX1P28360 303 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 RIDAP52758 137 aaKnown RBP10.54□□□□□ -0.72
VTA1-203ENST00000452973 ATAD3CQ5T2N8 411 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 NDUFAF7Q7L592 441 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 TOMM5Q8N4H5 51 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 IMMP1LQ96LU5 166 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 GAL3ST1Q99999 423 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 LNP1A1A4G5 178 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 A6NIZ1 184 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 PHYHO14832 338 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 ZNF208O43345 1280 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 AGFG1P52594 562 aaKnown RBP10.54□□□□□ -0.72
VTA1-203ENST00000452973 RAP1BP61224 184 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 RAP1AP62834 184 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 RASGEF1BQ0VAM2 473 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 RIN1Q13671 783 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 DCAF12Q5T6F0 453 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 ZNF468Q5VIY5 522 aaPredicted RBP10.54□□□□□ -0.72
VTA1-203ENST00000452973 RPS19BP1Q86WX3 136 aaKnown RBP10.54□□□□□ -0.72
VTA1-203ENST00000452973 OR6F1Q8NGZ6 308 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 SYNPRQ8TBG9 265 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 MNTQ99583 582 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 ALKBH4Q9NXW9 302 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 AKAP7Q9P0M2 348 aaPredicted RBP10.54□□□□□ -0.72
VTA1-203ENST00000452973 LOXL2Q9Y4K0 774 aa10.54□□□□□ -0.72
VTA1-203ENST00000452973 CDAP32320 146 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 RPS15P62841 145 aaKnown RBP10.53□□□□□ -0.72
VTA1-203ENST00000452973 RAET1LQ5VY80 246 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 B3GNTL1Q67FW5 361 aaPredicted RBP10.53□□□□□ -0.72
VTA1-203ENST00000452973 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.53□□□□□ -0.72
VTA1-203ENST00000452973 UEVLDQ8IX04 471 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 SLC26A10Q8NG04 563 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 ASB17Q8WXJ9 295 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 TRIM63Q969Q1 353 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 FYTTD1Q96QD9 318 aaKnown RBP10.53□□□□□ -0.72
VTA1-203ENST00000452973 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
VTA1-203ENST00000452973 KCNK15Q9H427 330 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms