RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 OR5W2Q8NH69 310 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 TERB2Q8NHR7 220 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 THEM6Q8WUY1 208 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 RGP1Q92546 391 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 THRSPQ92748 146 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 EDAQ92838 391 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 CDS1Q92903 461 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 ARL11Q969Q4 196 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 PSMG2Q969U7 264 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 ARRDC3Q96B67 414 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 FBXO17Q96EF6 278 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 IGSF21Q96ID5 467 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 TPD52L3Q96J77 140 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 APOLD1Q96LR9 279 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 FOXN4Q96NZ1 517 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 GAL3ST4Q96RP7 486 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 CLCC1Q96S66 551 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 SEPHS2Q99611 448 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 CITED2Q99967 270 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 NIPSNAP1Q9BPW8 284 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 C20orf144Q9BQM9 153 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 MXRA8Q9BRK3 442 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 THUMPD3Q9BV44 507 aaKnown RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 RIOK2Q9BVS4 552 aaKnown RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 SCRT1Q9BWW7 348 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 LAT2Q9GZY6 243 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 MEGF9Q9H1U4 602 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 SYT4Q9H2B2 425 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 TMEM38AQ9H6F2 299 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 TMEM27Q9HBJ8 222 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 ADGRL4Q9HBW9 690 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 DNAJC4Q9NNZ3 241 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 KRCC1Q9NPI7 259 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 MKKSQ9NPJ1 570 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 SEMA4BQ9NPR2 832 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 SNTG1Q9NSN8 517 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 TAS2R5Q9NYW4 299 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 DOK5Q9P104 306 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 KLHL8Q9P2G9 620 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 KCNE5Q9UJ90 142 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 IKZF2Q9UKS7 526 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF346Q9UL40 294 aaKnown RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 UBE2J1Q9Y385 318 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 HES2Q9Y543 173 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 HELZP42694 1942 aaKnown RBP3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 WDR81Q562E7 1941 aa3.27□□□□□ -1.89
HMGB3P8-201ENST00000449709 DSPPQ9NZW4 1301 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 A0A087WWC5 75 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TRAV14DV4A0A0A6YYC5 116 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 A0A0A6YYH2 397 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 IGHV2-70DA0A0C4DH43 119 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TEX13DA0A0J9YY54 714 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 WDR27A2RRH5 827 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CLEC18AA5D8T8 446 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 NAP1L6A6NFF2 107 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 GAGE10A6NGK3 116 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 A6NJ64 397 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR52A4PA6NMU1 304 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 UBFD1O14562 309 aaKnown RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SCAMP2O15127 329 aaKnown RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CCL25O15444 150 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CSO75390 466 aaKnown RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SLC25A12O75746 678 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 MMP23AO75900 390 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CDRT1O95170 752 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SOD1P00441 154 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CD74P04233 296 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 ICAM1P05362 532 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SOD3P08294 240 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CYC1P08574 325 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 FCGR3AP08637 254 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 FAM157CP0CG43 387 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SRMP19623 302 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 ANOS1P23352 680 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CYP2F1P24903 491 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TM4SF1P30408 202 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 ARL3P36405 182 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 PDLIM4P50479 330 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 NOVA1P51513 510 aaKnown RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 CAV2P51636 162 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 VAMP7P51809 220 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 GAS1P54826 345 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 FOXL2P58012 376 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TRA2BP62995 288 aaKnown RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SIM1P81133 766 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 RHOGP84095 191 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 HEPACAMQ14CZ8 416 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 ABRAXAS2Q15018 415 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 SPHARQ15513 63 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 PRSS8Q16651 343 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 NDUFA9Q16795 377 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 VMACQ2NL98 169 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TTLL9Q3SXZ7 439 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 DUSP28Q4G0W2 176 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 AKIRIN2Q53H80 203 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TECRLQ5HYJ1 363 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 IDNKQ5T6J7 187 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 MARC1Q5VT66 337 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 TMEM268Q5VZI3 342 aa3.26□□□□□ -1.89
HMGB3P8-201ENST00000449709 NCR3LG1Q68D85 454 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms