RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 RELNP78509 3460 aa12.91□□□□□ -0.34
TNF-208ENST00000449264 FAM208BQ5VWN6 2430 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 CACNA1CQ13936 2221 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 MPZL1O95297 269 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 LYNP07948 512 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 CEACAM8P31997 349 aaPredicted RBP12.9□□□□□ -0.34
TNF-208ENST00000449264 SLC15A1P46059 708 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 SLC35A2P78381 396 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 TMED1Q13445 227 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 KCTD21Q4G0X4 260 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 STX19Q8N4C7 294 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 SMAP2Q8WU79 429 aaPredicted RBP12.9□□□□□ -0.34
TNF-208ENST00000449264 TBX5Q99593 518 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 YTHDF1Q9BYJ9 559 aaKnown RBP12.9□□□□□ -0.34
TNF-208ENST00000449264 LINC00470Q9BZP3 86 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 CCDC90BQ9GZT6 254 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 CNOT2Q9NZN8 540 aaKnown RBP12.9□□□□□ -0.34
TNF-208ENST00000449264 COMMD3-BMI1R4GMX3 469 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 CHD6Q8TD26 2715 aa12.9□□□□□ -0.34
TNF-208ENST00000449264 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 E9PLN8 166 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 CRHP06850 196 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 GAAP10253 952 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 CTSSP25774 331 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 LAP3P28838 519 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 RPS27P42677 84 aaKnown RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 ZNF133P52736 654 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 ADAM8P78325 824 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 ST3GAL4Q11206 333 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 RAB40BQ12829 278 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 KLHL22Q53GT1 634 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 RIPPLY2Q5TAB7 128 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 FBXW9Q5XUX1 488 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 OR10H4Q8NGA5 316 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 OR52I1Q8NGK6 324 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 OR6N2Q8NGY6 317 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 IPCEF1Q8WWN9 437 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 STARD4Q96DR4 205 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 INTS14Q96SY0 518 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 VKORC1Q9BQB6 163 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 SFXN3Q9BWM7 321 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 OPN3Q9H1Y3 402 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 ZNF696Q9H7X3 374 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 WDR76Q9H967 626 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 MRPL22Q9NWU5 206 aaKnown RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 HAO2Q9NYQ3 351 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 ERVK-18Q9QC07 812 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 Q9UFV3 132 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 MEMO1Q9Y316 297 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 UGT2A1Q9Y4X1 527 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 HIVEP3Q5T1R4 2406 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 CCL21O00585 134 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 RGS10O43665 173 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 RAB36O95755 333 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 FADS2O95864 444 aaKnown RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 TFP02787 698 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 SBK2P0C263 348 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 B4GALT1P15291 398 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 BMP5P22003 454 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 C21orf33P30042 268 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 GUCA1AP43080 201 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 BLVRAP53004 296 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 FOXG1P55316 489 aaPredicted RBP12.89□□□□□ -0.35
TNF-208ENST00000449264 MVKQ03426 396 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 HSF2Q03933 536 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 POU4F2Q12837 409 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 SGCAQ16586 387 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 OR10H5Q8NGA6 315 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 C11orf40Q8WZ69 217 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 MYDGFQ969H8 173 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 TTTY10Q9BZA0 68 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 DUSP21Q9H596 190 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 EMC7Q9NPA0 242 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 CCNB1IP1Q9NPC3 277 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 TAS2R16Q9NYV7 291 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 MALT1Q9UDY8 824 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 POLR1DQ9Y2S0 133 aa12.89□□□□□ -0.35
TNF-208ENST00000449264 IRGMA1A4Y4 181 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 MAGEA13PA6NCF6 341 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 HSPB2A8KAH6 182 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 SCG5P05408 212 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 CDK1P06493 297 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 HTR1AP08908 422 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 ADRA2AP08913 450 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 SPARCP09486 303 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 ZNF823P16415 610 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 HCCSP53701 268 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 HSPB2Q16082 182 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 TMEM211Q6ICI0 200 aa12.88□□□□□ -0.35
TNF-208ENST00000449264 ABHD12BQ7Z5M8 362 aaPredicted RBP12.88□□□□□ -0.35
TNF-208ENST00000449264 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms