RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 CNEP1R1Q8N9A8 125 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 OR4A16Q8NH70 328 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 WWTR1Q9GZV5 400 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 RNF32Q9H0A6 362 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 HIPK2Q9H2X6 1198 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 HRASLSQ9HDD0 168 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 ACOXLQ9NUZ1 547 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 HIF1ANQ9NWT6 349 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 TCRBV5S2A0A599 114 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 OR6C76A6NM76 312 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 H2AFB1P0C5Y9 115 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 CD1EP15812 388 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 HOXA1P49639 335 aaPredicted RBP7.15□□□□□ -1.27
NEDD9-204ENST00000448183 BDH1Q02338 343 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 NR0B2Q15466 257 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 CDH26Q8IXH8 852 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 FAM71CQ8NEG0 241 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 OR6K3Q8NGY3 331 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 PFN4Q8NHR9 129 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 PIGTQ969N2 578 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 HHIPQ96QV1 700 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 AKIP1Q9NQ31 210 aa7.15□□□□□ -1.27
NEDD9-204ENST00000448183 CRYBG1Q9Y4K1 1723 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 LRP5LA4QPB2 252 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 BTBD17A6NE02 478 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PPP5D1E7EU14 171 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 H7C1Q1 480 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 FXYD1O00168 92 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 TXNDC12O95881 172 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 APOA2P02652 100 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 F11P03951 625 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 THBS1P07996 1170 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 ACKR3P25106 362 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 EIF1P41567 113 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 CLDN20P56880 219 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 GRB2P62993 217 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF92Q03936 586 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 DUSP5Q16690 384 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 LTC4SQ16873 150 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 C1orf140Q5VVS0 124 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 FCRL6Q6DN72 434 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM81Q6P7N7 255 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 GCNT2Q8N0V5 402 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 GJC3Q8NFK1 279 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 TMED6Q8WW62 240 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 YIPF6Q96EC8 236 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 DCBLD2Q96PD2 775 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 SLC22A12Q96S37 553 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 C20orf24Q9BUV8 137 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 NKX2-4Q9H2Z4 354 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PLK3Q9H4B4 646 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PPP1R14DQ9NXH3 145 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 CSAG2Q9Y5P2 127 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 TIAM2Q8IVF5 1701 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF724A8MTY0 619 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 TRIM77I1YAP6 450 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 TUSC2O75896 110 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 OLFM2O95897 454 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 CSF3P09919 207 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 MGST1P10620 155 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 CD80P33681 288 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 NKX2-1P43699 371 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 NPBWR1P48145 328 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PXNP49023 591 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 MRPS21P82921 87 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 MANEAQ5SRI9 462 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PRAMEF20Q5VT98 475 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 NLRC3Q7RTR2 1065 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 SMIM15Q7Z3B0 74 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 CPEB2Q7Z5Q1 589 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 DPPA2Q7Z7J5 298 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 RIMKLAQ8IXN7 391 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 SYS1Q8N2H4 156 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 APH1BQ8WW43 257 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 LIPHQ8WWY8 451 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 MRPL38Q96DV4 380 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 LRFN5Q96NI6 719 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 OPALINQ96PE5 141 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PLEKHF2Q9H8W4 249 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 HEYLQ9NQ87 328 aaPredicted RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 UFSP2Q9NUQ7 469 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 RPH3ALQ9UNE2 315 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 MYH9P35579 1960 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 A0A0A6YYJ9 748 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 H7BYZ3 331 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 HMGN4O00479 90 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 SOD1P00441 154 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 ICAM2P13598 275 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 PSMB6P28072 239 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 RPL27P61353 136 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 EXOSC2Q13868 293 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF239Q16600 458 aaKnown RBP7.14□□□□□ -1.27
NEDD9-204ENST00000448183 C17orf107Q6ZR85 190 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 GABRG1Q8N1C3 465 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 FAM174AQ8TBP5 190 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 SEMA4CQ9C0C4 833 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 BCO1Q9HAY6 547 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 HCSTQ9UBK5 93 aa7.14□□□□□ -1.27
NEDD9-204ENST00000448183 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms