RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 SELENOIQ9C0D9 397 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TP63Q9H3D4 680 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 GMPR2Q9P2T1 348 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 DIMT1Q9UNQ2 313 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 QSER1Q2KHR3 1735 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CCDC163A0A0D9SF12 145 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TMEM72A0PK05 275 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CLIC3O95833 236 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TFP02787 698 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TUBG1P23258 451 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 AADACL4Q5VUY2 407 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 OTUD1Q5VV17 481 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FCRLAQ7L513 359 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 OR6V1Q8N148 313 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ARIH2OSQ8N7S6 290 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 NPEPL1Q8NDH3 523 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ITFG2Q969R8 447 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PIGLQ9Y2B2 252 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 WDR37Q9Y2I8 494 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FOCADQ5VW36 1801 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 GABRPO00591 440 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 DFFBO76075 338 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 BLVRBP30043 206 aaPredicted RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CD79BP40259 229 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 RPS27AP62979 156 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 UBA52P62987 128 aaKnown RBP7.83□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF766Q5HY98 468 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 LILRA6Q6PI73 481 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 WWTR1Q9GZV5 400 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SLC39A9Q9NUM3 307 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TRPM7Q96QT4 1865 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FAM166BA8MTA8 275 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CALCBP10092 127 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 LEXMQ3ZCV2 418 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CREB3L2Q70SY1 520 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SLC36A1Q7Z2H8 476 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FAM217AQ8IXS0 508 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 GCNT2Q8N0V5 402 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 BPIFB2Q8N4F0 458 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 BEST4Q8NFU0 473 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 OR10X1Q8NGY0 326 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 SLC39A7Q92504 469 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 FGF14Q92915 247 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TMIGD2Q96BF3 282 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 TNFRSF13CQ96RJ3 184 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 C12orf49Q9H741 205 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 PCM1Q15154 2024 aa7.83□□□□□ -1.16
PTPN3-204ENST00000446349 CASP8AP2Q9UKL3 1982 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF195O14628 629 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ITGB8P26012 769 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ARRB2P32121 409 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 RFX2P48378 723 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 HTD2P86397 168 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 PTOV1Q86YD1 416 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 C1orf174Q8IYL3 243 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 FBXO27Q8NI29 283 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 APOBEC4Q8WW27 367 aaKnown RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 SCG5P05408 212 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CEACAM5P06731 702 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 HNF4GQ14541 408 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 SLCO1C1Q9NYB5 712 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 SH2D7A6NKC9 451 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 UPK1BO75841 260 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ST6GAL1P15907 406 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CLDN6P56747 220 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 DYRK1AQ13627 763 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 RNLSQ5VYX0 342 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 RGS7BPQ6MZT1 257 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CCBE1Q6UXH8 406 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 LRRC61Q9BV99 259 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 PLXNA1Q9UIW2 1896 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CACNA1CQ13936 2221 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF14P17017 642 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 WDR74Q6RFH5 385 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 COX15Q7KZN9 410 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CMTM2Q8TAZ6 248 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ABHD4Q8TB40 342 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZDHHC16Q969W1 377 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 TXNIPQ9H3M7 391 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 C12orf10Q9HB07 376 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CYSLTR2Q9NS75 346 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 FAM212BQ9NTI7 297 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 NDUFB7P17568 137 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ABCD3P28288 659 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 EDDM3BP56851 147 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 LRRC10Q5BKY1 277 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 TRNP1Q6NT89 227 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF808Q8N4W9 903 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 TRMT61AQ96FX7 289 aaKnown RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 MRGPRX3Q96LB0 322 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 RAB1BQ9H0U4 201 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 KCNJ16Q9NPI9 418 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 SNX11Q9Y5W9 270 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 BRWD3Q6RI45 1802 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 HRO43593 1189 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 OR8U8P0C7N1 319 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 ZNF728P0DKX0 622 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 CHATP28329 748 aa7.82□□□□□ -1.16
PTPN3-204ENST00000446349 EPHA8P29322 1005 aaPredicted RBP7.82□□□□□ -1.16
PTPN3-204ENST00000446349 PSMB10P40306 273 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms