RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 PYCR1P32322 319 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 CAPGP40121 348 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 ASCL1P50553 236 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 ADARB1P78563 741 aaKnown RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 ARF1P84077 181 aaKnown RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 ETFDHQ16134 617 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 HIST3H3Q16695 136 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 TTC23Q5W5X9 447 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 CXXC5Q7LFL8 322 aaKnown RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 ABHD12BQ7Z5M8 362 aaPredicted RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 BCDIN3DQ7Z5W3 292 aaKnown RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 CPOQ8IVL8 374 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 OR51L1Q8NGJ5 315 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 HCAR1Q9BXC0 346 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 OR51V1Q9H2C8 321 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 SEC61A2Q9H9S3 476 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
LIME1-202ENST00000444951 RASSF1Q9NS23 344 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 GALNT8Q9NY28 637 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 AASSQ9UDR5 926 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 MALT1Q9UDY8 824 aa15.13■□□□□ 0.01
LIME1-202ENST00000444951 CIB4A0PJX0 185 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 DCTN6O00399 190 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 SLC16A6O15403 523 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 GPANK1O95872 356 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 MPGP29372 298 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 CDAP32320 146 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 ZNF84P51523 738 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 RIPPLY3P57055 190 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 IL5RAQ01344 420 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 FAM27E3Q08E93 113 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 SNTB1Q13884 538 aaKnown RBP15.12■□□□□ 0.01
LIME1-202ENST00000444951 KLHL12Q53G59 568 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 OTPQ5XKR4 325 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 DNM1P34Q6PK57 102 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 SLC25A47Q6Q0C1 308 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 SPNS3Q6ZMD2 512 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 OR6V1Q8N148 313 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 GABRG1Q8N1C3 465 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 PROKR2Q8NFJ6 384 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 BBS1Q8NFJ9 593 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 TMEM163Q8TC26 289 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 NMD3Q96D46 503 aaKnown RBP15.12■□□□□ 0.01
LIME1-202ENST00000444951 PITX2Q99697 317 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 RASSF4Q9H2L5 321 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 JKAMPQ9P055 326 aa15.12■□□□□ 0.01
LIME1-202ENST00000444951 COA3Q9Y2R0 106 aaPredicted RBP15.12■□□□□ 0.01
LIME1-202ENST00000444951 HRNRQ86YZ3 2850 aaPredicted RBP15.11■□□□□ 0.01
LIME1-202ENST00000444951 NF1P21359 2839 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 A0A096LPE4 126 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 A0A1W2PPZ6 126 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 H0YJX3 145 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 AHCYL1O43865 530 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 KHDRBS3O75525 346 aaKnown RBP15.11■□□□□ 0.01
LIME1-202ENST00000444951 RAD51DO75771 328 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 ITGA5P08648 1049 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 GNAO1P09471 354 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 SPI1P17947 270 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 CRABP1P29762 137 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 RPS7P62081 194 aaKnown RBP15.11■□□□□ 0.01
LIME1-202ENST00000444951 KEAP1Q14145 624 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 SGCAQ16586 387 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 DEPDC4Q8N2C3 294 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 FNDC8Q8TC99 324 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 ZNRF4Q8WWF5 429 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 MUS81Q96NY9 551 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 SNX18Q96RF0 628 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 DDOQ99489 341 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 APOL4Q9BPW4 351 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 ZNF226Q9NYT6 803 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 TAS2R16Q9NYV7 291 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 DNAJC27Q9NZQ0 273 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 B9D1Q9UPM9 204 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 ITPR3Q14573 2671 aa15.11■□□□□ 0.01
LIME1-202ENST00000444951 FREM1Q5H8C1 2179 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 E9PQ18 207 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 H0YAE9 185 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 CNOT4O95628 575 aaKnown RBP15.1■□□□□ 0.01
LIME1-202ENST00000444951 HLA-DQA2P01906 255 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 B4GALT1P15291 398 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 IL32P24001 234 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 CD79BP40259 229 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 P2RY6Q15077 328 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 ALKBH2Q6NS38 261 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 KLHL24Q6TFL4 600 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 ZNF813Q6ZN06 617 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 BHLHA15Q7RTS1 189 aaPredicted RBP15.1■□□□□ 0.01
LIME1-202ENST00000444951 TMEM200AQ86VY9 491 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 ENTHD1Q8IYW4 607 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 ZNF433Q8N7K0 673 aaPredicted RBP15.1■□□□□ 0.01
LIME1-202ENST00000444951 OR6K6Q8NGW6 343 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 OR2T4Q8NH00 348 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 TFAP2CQ92754 450 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 PTP4A1Q93096 173 aa15.1■□□□□ 0.01
LIME1-202ENST00000444951 KISS1RQ969F8 398 aaPredicted RBP15.1■□□□□ 0.01
LIME1-202ENST00000444951 H2AFY2Q9P0M6 372 aaPredicted RBP15.1■□□□□ 0.01
LIME1-202ENST00000444951 PRRC2AP48634 2157 aaKnown RBP15.09■□□□□ 0.01
LIME1-202ENST00000444951 ALPK2Q86TB3 2170 aa15.09■□□□□ 0.01
LIME1-202ENST00000444951 ANKHD1Q8IWZ3 2542 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms